LabLaskin / MSI-self-supervised-clusteringLinks
Autonomous and accurate clustering of co-localized ion images in a self-supervised manner.
☆11Updated 4 years ago
Alternatives and similar repositories for MSI-self-supervised-clustering
Users that are interested in MSI-self-supervised-clustering are comparing it to the libraries listed below
Sorting:
- An open-source Python package to unify raw MS data accession and storage.☆31Updated this week
- Mass spectrometry imaging applications for interactive analysis in MITK (M²aia)☆21Updated this week
- A parser to read .imzML files with python☆50Updated last year
- Evaluating batch correction methods for image-based cell profiling☆15Updated 5 months ago
- modular & open DIA search☆100Updated this week
- R Package for Systematic Optimization of Metabolomic Data Processing☆17Updated 9 months ago
- ☆13Updated 4 years ago
- Collisional cross-section prediction for modified and multiconformational peptides☆13Updated last week
- Reference pipeline for FDR-controlled metabolite annotation for imaging mass spectrometry☆20Updated 9 years ago
- Open-source C++ and Python module for opening binary timsTOF data files.☆50Updated 7 months ago
- Infrastructure of AlphaX ecosystem☆53Updated this week
- MS/MS prediction for peptides☆24Updated 5 years ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆47Updated last week
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆18Updated 2 years ago
- Cloud engine and platform for metabolite annotation for imaging mass spectrometry☆55Updated this week
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆30Updated 3 months ago
- AlphaViz is a cutting-edge browser-based interactive visualization tool allowing to visualize the processed mass spectrometry data acquir…☆35Updated 9 months ago
- Specter: linear deconvolution for targeted analysis of data-independent acquisition mass spectrometry proteomics☆18Updated 7 years ago
- MSBooster allows users to add deep learning-based features to .pin files before Percolator PSM rescoring☆21Updated this week
- A collection of awesome lipidomics tools and resources☆17Updated 3 years ago
- Python Package for the downstream analysis of mass-spectrometry-based proteomics data☆80Updated 2 months ago
- DLL and SO from Bruker.☆12Updated 3 years ago
- Python framework for Deep Learning in Proteomics☆38Updated this week
- MassDash: A web-based dashboard for streamlined DIA-MS visualization, analysis, prototyping, and optimization☆21Updated 3 weeks ago
- A collection of available Python tools for Proteomics analysis☆67Updated this week
- ☆16Updated last month
- FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks☆44Updated 7 months ago
- File format for 96-well plate layouts.☆24Updated 2 years ago
- ☆16Updated this week
- Cell Painting Gallery☆121Updated this week