gimelbrantlab / QllelicLinks
Enabling differential allele-specific analysis
☆11Updated 7 months ago
Alternatives and similar repositories for Qllelic
Users that are interested in Qllelic are comparing it to the libraries listed below
Sorting:
- Preprocessing sequencing data for allele-specific analysis☆12Updated 5 months ago
- ☆23Updated 8 months ago
- Scripts and files used in the generation of the COLO829 somatic SV truthset.☆13Updated 3 years ago
- Plot CNV data with a genome viewer in R☆15Updated 8 years ago
- Code associated with the manuscript "A complete reference genome improves analysis of human genetic variation".☆17Updated 2 years ago
- Fast and scalable variant annotation tool☆30Updated 3 years ago
- Genotyping of segregating mobile elements insertions☆19Updated 4 years ago
- heuristics to merge structural variant calls in VCF format.☆36Updated 8 years ago
- ☆36Updated 2 years ago
- ☆35Updated 4 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 4 months ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆42Updated last month
- ☆22Updated 3 weeks ago
- Pipeline for structural variation detection in cohorts☆49Updated 3 years ago
- BAMixChecker: A fast and efficient tool for sample matching checkup☆15Updated 3 years ago
- Immuological gene typing and annotation for genome assembly☆37Updated 5 months ago
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆30Updated 2 weeks ago
- An accurate repeat detection from Nanopore data using deep learning and image techniques☆23Updated 2 years ago
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆18Updated last week
- ☆19Updated 2 years ago
- ☆13Updated 2 years ago
- Sample Contamination Estimate from VCF☆20Updated 9 months ago
- ☆19Updated last year
- Automated Detection and Qualification of Differential Methylation☆14Updated last year
- Long-read splice alignment with high accuracy☆64Updated 11 months ago
- Phase reads, assemble haplotypes and detect SVs☆19Updated 4 years ago
- ☆23Updated 4 months ago
- PopSTR - A Population based microsatellite genotyper☆33Updated last year
- R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework☆41Updated 3 weeks ago
- Computes various SV statistics☆14Updated last year