☆10Oct 18, 2021Updated 4 years ago
Alternatives and similar repositories for PGx_Guidelines
Users that are interested in PGx_Guidelines are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R package to analyze large-scale pharmacogenomic datasets.☆71Mar 25, 2026Updated 3 weeks ago
- WES HLA Typing based on multiple alternative tools☆18Mar 8, 2021Updated 5 years ago
- Velodrome combines semi-supervised learning and out-of-distribution generalization (domain generalization) for drug response prediction a…☆17Nov 17, 2021Updated 4 years ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Jan 24, 2023Updated 3 years ago
- Functions to extract information from Oxford Nanopore sequencing data and alignments☆11Dec 4, 2025Updated 4 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆14Jan 31, 2024Updated 2 years ago
- Shiny app for geno-pheno catalog☆11Nov 4, 2022Updated 3 years ago
- PAnno is a Pharmacogenomics Annotation tool for clinical genomic testing.☆16Dec 28, 2022Updated 3 years ago
- ☆28Oct 5, 2018Updated 7 years ago
- Realtime base modification frequency tool☆13Sep 16, 2025Updated 6 months ago
- ☆15Oct 10, 2023Updated 2 years ago
- notebook repository☆12Jan 17, 2022Updated 4 years ago
- A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics☆14Jan 9, 2026Updated 3 months ago
- PePPer - Personalized Perturbation Profiler☆11Oct 4, 2018Updated 7 years ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- The MBatch R package and Docker image are designed to help assess and correct for batch effects.☆19May 31, 2024Updated last year
- Check out the dash visualization at https://dash-drug-explorer.plot.ly/out☆12Dec 26, 2022Updated 3 years ago
- A deep learning-based SNP calling method to identify SNPs based on low-coverage Nanopore sequencing reads.☆21Nov 20, 2022Updated 3 years ago
- Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…☆15May 12, 2025Updated 11 months ago
- Human mitochondrial variants annotation using HmtVar.☆18Oct 16, 2023Updated 2 years ago
- PGxPOP☆17Jan 25, 2023Updated 3 years ago
- R package to work with ctDNA sequencing data☆47Feb 20, 2022Updated 4 years ago
- Predictive Modeling of Gene Expression in Skeletal Muscle Using scRNA-seq☆11Oct 3, 2024Updated last year
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Nov 18, 2025Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Web application for clinical pharmacogenomic interpretation☆10Mar 3, 2017Updated 9 years ago
- The solution to cameyon16 and camelyon17 challenge and also to your own WSI data project.☆15Jul 3, 2019Updated 6 years ago
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆14Nov 21, 2019Updated 6 years ago
- Molecular Oncology Almanac, a clinical interpretation algorithm paired with a novel underlying knowledge base for precision cancer medici…☆18Feb 2, 2026Updated 2 months ago
- Tutorials and code for ISMB 2019 short course on Recent Advances in Statistical Methods and Computational Algorithms for Single-Cell Omic…☆41Jul 21, 2019Updated 6 years ago
- Code to run OncoSig Analyses☆18Sep 30, 2020Updated 5 years ago
- RCSM(Recommended Connectivity-map Scoring Methods)☆17Aug 2, 2019Updated 6 years ago
- Scripts to Analyze DTC Sequencing and Genotyping Data (and some comparisons to Veritas WGS data)☆20Nov 28, 2024Updated last year
- Toolbox package for organizing and working with TCGA data☆28Mar 26, 2026Updated 2 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆39Apr 7, 2026Updated last week
- A Python package for pharmacogenomics (PGx) research☆86Mar 22, 2026Updated 3 weeks ago
- phy-mer☆11Oct 12, 2017Updated 8 years ago
- PanGenome Graph Building with the first 100 assemblies from the 1000G ONT Sequencing Consortium☆12Apr 5, 2025Updated last year
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Feb 17, 2026Updated last month
- Genomic Data Science Specialization helps in learning genomic data science including Python, R, Bioconductor, and Galaxy. This is offered…☆14Jun 26, 2015Updated 10 years ago
- A phase-aware pharmacogenomic diplotyper for PacBio datasets☆20Mar 24, 2026Updated 3 weeks ago