Alternatives and similar repositories for PGx_Guidelines

Users that are interested in PGx_Guidelines are comparing it to the libraries listed below

• Xinglab / IRIS
  IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening
  ☆26Updated last year
• TRON-Bioinformatics / neofox
  Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors
  ☆33Updated 7 months ago
• CancerRxGene / gdsctools
  Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )
  ☆36Updated 3 years ago
• umccr / neoantigens
  🏺 Exploring novel tumor epitope identification
  ☆36Updated 5 years ago
• IxI-97 / BiomiX
  R tool to analyse and integrate multiple -omics data
  ☆14Updated 4 months ago
• epigen / KPNN
  Knowledge-primed neural networks
  ☆38Updated 2 years ago
• crazyhottommy / Machine_learning_drug_discovery
  ☆27Updated 6 months ago
• idekerlab / G2PT
  ☆19Updated 2 months ago
• kundajelab / coessentiality
  Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
  ☆27Updated 3 years ago
• emmijokinen / TCRconv
  TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TC…
  ☆25Updated 3 years ago
• kundajelab / bpnet-manuscript
  BPNet manuscript code.
  ☆12Updated 4 years ago
• statbiophys / HLAGuessr
  ☆18Updated 6 months ago
• masato-ogishi / Repitope
  Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.
  ☆24Updated last year
• uio-bmi / compairr
  Comparison of Adaptive Immune Receptor Repertoires
  ☆28Updated 9 months ago
• CancerRxGene / gdscIC50
  An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.
  ☆28Updated 2 years ago
• crisprVerse / Tutorials
  Tutorials for the crisprVerse
  ☆13Updated 8 months ago
• matsengrp / sumrep
  Summary statistics for repertoires
  ☆17Updated 2 years ago
• dwgoon / nezzle
  Network Visualization using both GUI and Programming
  ☆29Updated 5 months ago
• ctokheim / deepDegron
  Deep learning model to predict degron sequences
  ☆19Updated 2 years ago
• maxwellsh / DIGDriver
  Flexible and efficient tests for evidence of positive selection anywhere in the cancer genome.
  ☆26Updated 3 years ago
• SchubertLab / epytope
  ☆23Updated 7 months ago
• hart-lab / drugz
  DRUGZ software
  ☆24Updated 4 years ago
• califano-lab / OncoSig
  Code to run OncoSig Analyses
  ☆18Updated 5 years ago
• Sanofi-Public / RiboNN
  RiboNN: predicting translation efficiencies from mRNA sequences
  ☆40Updated 3 weeks ago
• MaayanLab / archs4py
  Python package to load and query ARCHS4 data
  ☆23Updated 3 months ago
• ocbe-uio / DIscBIO
  A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics
  ☆13Updated last year
• sigven / oncoEnrichR
  Explore the cancer relevance of your gene list
  ☆52Updated last month
• kuijjerlab / retriever
  Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data
  ☆15Updated 3 years ago
• JanZrimec / DeepExpression
  ☆33Updated 2 years ago
• salbrec / seqQscorer
  ☆22Updated last month