franklin library for NGS sequencing analysis.
☆25Oct 10, 2012Updated 13 years ago
Alternatives and similar repositories for franklin
Users that are interested in franklin are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- a simple read-only sequence database, designed for short reads☆20Dec 19, 2016Updated 9 years ago
- Generate mutated sequence files from a reference genome.☆11Dec 26, 2022Updated 3 years ago
- Search flexible patterns within tree structures using regular expression like syntax.☆10Sep 22, 2017Updated 8 years ago
- Sequence-independent identification and removal of adapters/systemic contamination in shotgun sequencing data. https://doi.org/10.1093/bi…☆18Apr 4, 2023Updated 3 years ago
- An extension of Velvet assembler to de novo metagenome assembly from short sequence reads☆15May 29, 2012Updated 13 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Scripts and instructions for submitting annotated microbial genomes to Genbank☆16Feb 23, 2016Updated 10 years ago
- Bloocoo is a k-mer spectrum-based read error corrector, designed to correct large datasets with a very low memory footprint.☆12May 22, 2017Updated 8 years ago
- de novo sequence assembler using string graphs☆244Aug 8, 2019Updated 6 years ago
- Pipeline for Illumina shotgun sequencing of 16S rRNA amplicon sequences☆14Sep 2, 2016Updated 9 years ago
- NeXML is an exchange standard for representing phyloinformatic data.☆15Feb 23, 2017Updated 9 years ago
- Bio::Phylo - Phyloinformatic analysis using Perl☆17Dec 11, 2025Updated 4 months ago
- ThermoFisher Ion Torrent plugin to detect fetal trisomies and estimate fetal fraction☆17Mar 23, 2018Updated 8 years ago
- miscellaneous script-like stuff in go for bioinformatics☆14Nov 4, 2016Updated 9 years ago
- Overlap assembler of paired-end DNA sequences generated by Illumina☆23Sep 2, 2016Updated 9 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆16Feb 19, 2026Updated 2 months ago
- Quick Read Quality Control☆20Feb 28, 2023Updated 3 years ago
- MIcrobiomes using Compressive Acceleration☆17Feb 10, 2018Updated 8 years ago
- ☆20Feb 13, 2016Updated 10 years ago
- ☆92Jan 11, 2022Updated 4 years ago
- phy-mer☆11Oct 12, 2017Updated 8 years ago
- Probabilistic single-individual haplotyping☆10Mar 15, 2019Updated 7 years ago
- Python XML Serialization☆21Aug 30, 2015Updated 10 years ago
- an ensemble usage of MAFFT-linsi --add on large datasets☆13May 31, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A fast and flexible program to annotate/interpret genetic variants in VCF/BCF file☆21Oct 26, 2020Updated 5 years ago
- Nanopore Real-Time Analysis Tool☆17Sep 4, 2024Updated last year
- COSAP: Comparative Sequencing Analysis Platform☆19Dec 10, 2025Updated 4 months ago
- Adaptive haplotype assembly for efficiently leveraging high coverage in long reads☆13Sep 4, 2018Updated 7 years ago
- SANEFALCON (Single reAds Nucleosome-basEd FetAL fraCtiON): Calculating the fetal fraction for noninvasive prenatal testing based on genom…☆14Jun 5, 2020Updated 5 years ago
- NiPTUNE. A Python library for NIPT analyses.☆11Nov 22, 2021Updated 4 years ago
- ☆16May 19, 2025Updated 11 months ago
- ☆13Jun 18, 2018Updated 7 years ago
- Processing application to configure XBees☆17Jan 11, 2011Updated 15 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A tool set to assess the quality of the per read phasing and reduce the errors.☆13Jun 25, 2020Updated 5 years ago
- Population Reference Graphs for the HLA and MHC.☆35Dec 18, 2018Updated 7 years ago
- Course material for the de novo assembly part of the INF-BIO9120 course at Univ. of Oslo Fall 2013☆37Oct 1, 2013Updated 12 years ago
- A repo of templates that I used when writing reports in ITU☆14Nov 3, 2018Updated 7 years ago
- Set of script for the paper on the cattle graph genome☆14Jan 10, 2023Updated 3 years ago
- Intrusion Detection System using Machine Learning and Ensemble Techniques☆21May 14, 2021Updated 4 years ago
- WITCH is a multiple sequence alignment method that uses multiple weighted HMMs to align unaligned sequences and find consensuses.☆13Nov 18, 2025Updated 5 months ago