Alternatives and similar repositories for humanpdac

Users that are interested in humanpdac are comparing it to the libraries listed below

• whwanglab / PDAC
  ☆13Updated 3 years ago
• ventolab / Human-Gonadal-Development-Atlas_HGDA
  ☆21Updated 8 months ago
• quadbio / organoid_regulomes
  Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids
  ☆29Updated 2 years ago
• coskunlab / scSpaMet
  ☆13Updated last year
• hsmaan / Iniquitate
  Analysis of imbalanced data and its impacts in a scRNA-seq integration setting
  ☆30Updated 5 months ago
• sdentro / copykat_pipeline
  ☆13Updated last year
• ding-lab / ST_subclone_publication
  Code for spatial subclone paper
  ☆13Updated 7 months ago
• satijalab / Mixscale
  ☆19Updated 4 months ago
• miccec / GBMstates
  Scripts from the GBM cellular states paper
  ☆19Updated 4 years ago
• wanglabtongji / STRIDE
  STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …
  ☆26Updated last year
• elo073 / 5loclung
  Custom codes accompanying single cell spatial transcriptomic study on the healthy human lung
  ☆12Updated last year
• wanglabtongji / SpaceScanner
  Scanner of specific spatial patterns in tissues
  ☆13Updated 3 years ago
• soumelis-lab / ICELLNET
  ☆20Updated last month
• Teddy-XiongGZ / DeepGSEA
  ☆17Updated last year
• klarman-cell-observatory / HTAPP-Pipelines
  A record of the analysis pipelines used to create the HTAPP data
  ☆33Updated 4 months ago
• JunyueCaoLab / EasySci
  Computational pipeline to process EasySci-RNA data.
  ☆21Updated last year
• walsh-quail-labs / IMC_Brain
  ☆20Updated 2 years ago
• yunguan-wang / Spacia
  ☆30Updated 3 months ago
• MarioniLab / hbca
  Code used to process the data of the HBCA project
  ☆31Updated last year
• yi-zhang / STHD
  STHD: probabilistic cell typing of Single spots in whole Transcriptome spatial data with High Definition
  ☆26Updated 4 months ago
• NCICCGPO / gdan-tmp-models
  Containerized cancer subtype prediction tools for gene expression, miRNA, DNA methylation, somatic mutations and copy number variation.
  ☆26Updated 4 months ago
• theislab / moslin
  Code, data and analysis for moslin.
  ☆14Updated 10 months ago
• bendemeo / shannonca
  Information-based dimensionality reduction
  ☆29Updated 8 months ago
• dyxmvp / Spatial_ATAC-seq
  ☆22Updated 2 years ago
• MarioniLab / oor_benchmark
  A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data
  ☆13Updated 10 months ago
• secrierlab / SpottedPy
  Hotspot cluster distance analysis in spatial transcriptomic data
  ☆29Updated 6 months ago
• FridleyLab / spatialGE
  Methods for visualization and analysis of spatially-resolved gene expression
  ☆21Updated 2 weeks ago
• QihuangZhang / CeLEry
  CeLEry: cell location recovery in single-cell RNA sequencing
  ☆35Updated 6 months ago
• raphael-group / CalicoST
  Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics
  ☆41Updated 2 weeks ago
• CyrilLagger / scDiffCom
  Difference in Intercellular Communication from scRNA-seq data
  ☆22Updated last year