Alternatives and similar repositories for causeSims

Users that are interested in causeSims are comparing it to the libraries listed below

• kjgleason / Primo
  Primo
  ☆16Updated 4 years ago
• cnfoley / mrclust
  R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.
  ☆17Updated 4 years ago
• hbliu / Kidney_Epi_Pri
  Kidney Epigenome and Transcriptome-based multi-stage Prioritization
  ☆17Updated 3 years ago
• explodecomputer / random-metal
  Adding random effects model to the METAL software
  ☆15Updated 2 years ago
• jrs95 / geni.plots
  GENI plots to visualise results from genome-wide association studies
  ☆31Updated last year
• bvoightlab / ColocQuiaL
  Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.
  ☆21Updated 5 months ago
• boxiangliu / locuscompare
  LocusCompare is an interactive visualization tool for comparing two genetic association datasets.
  ☆20Updated 2 years ago
• jbryois / scRNA_disease
  Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1
  ☆18Updated 5 years ago
• MRCIEU / PhenoSpD
  ☆18Updated 8 years ago
• RajLabMSSM / catalogueR
  Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).
  ☆14Updated 3 years ago
• yanglab-emory / TIGAR
  ☆22Updated 4 months ago
• jrs95 / gassocplot
  Regional association plots
  ☆26Updated last year
• sb452 / mr-code
  Code for implementing Mendelian randomization investigations
  ☆20Updated 10 years ago
• astheeggeggs / BipEx
  ☆10Updated last year
• oliviasabik / RACER
  An R package for generating comparative regional association plots
  ☆18Updated 3 months ago
• mkanai / mr-forestplot
  ☆11Updated 3 years ago
• LizaDarrous / PheWAS-cluster
  ☆21Updated last year
• jrs95 / gassocplot2
  Regional association plots
  ☆24Updated last year
• HLee-Six / colon_microbiopsies
  Code and files accompanying article "The landscape of somatic mutation in normal colorectal epithelial cells"
  ☆11Updated 4 years ago
• MRCIEU / epigraphdb-r
  R package for epigraphdb
  ☆28Updated last year
• MCorentin / vargen
  VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…
  ☆17Updated last year
• Wittelab / pancancer_pleiotropy
  Pan cancer summary statistics from meta analyses of UK Biobank and Kaiser GERA cohorts.
  ☆17Updated 5 years ago
• Stahl-Lab-MSSM / coloc2
  Upgrade to coloc
  ☆13Updated 7 years ago
• daisybio / ASimulatoR
  ASimulatoR: splice-aware RNA-seq data simulation https://doi.org/10.1093/bioinformatics/btab142
  ☆11Updated 3 years ago
• xqwen / torus
  QTL Discovery using Annotations
  ☆28Updated 3 years ago
• tobyjohnson / gtx
  Genetics ToolboX R package
  ☆32Updated 5 years ago
• Tuteja-Lab / TissueEnrich
  R package for tissue-specific gene enrichment
  ☆15Updated 3 years ago
• RajLabMSSM / ggLocusZoom
  Create LocusZoom-style plots in R.
  ☆22Updated 2 years ago
• shuangsong0110 / LDER
  We design a method for heritability estimation, namely LD Eigenvalue Regression (LDER), which extends the LDSC method and provides more a…
  ☆13Updated 4 months ago
• LaurenceHowe / SiblingGWAS
  Scripts for running a sibling GWAS
  ☆16Updated 3 years ago