qiime2 / q2view-old
A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations
☆14Updated last year
Alternatives and similar repositories for q2view-old:
Users that are interested in q2view-old are comparing it to the libraries listed below
- A method of assessing sequence complexity based on kmer frequencies☆32Updated 7 years ago
- Metagenome analysis using the Kraken software suite☆31Updated 2 years ago
- ☆16Updated last year
- Python bindings for the TaxonKit library☆39Updated 3 weeks ago
- Protein Alignment and Detection Interface☆61Updated last year
- A package to annotate protein sequences☆58Updated 2 months ago
- ☆31Updated 3 years ago
- Hclust2 is a handy tool for plotting heat-maps with several useful options to produce high quality figures that can be used in publicatio…☆12Updated 2 years ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆31Updated 3 years ago
- ☆26Updated 4 years ago
- ☆28Updated 10 months ago
- A QIIME 2 plugin for interaction with the Greengenes2 database☆28Updated 7 months ago
- Trimming tool for Oxford Nanopore sequence data☆21Updated 3 years ago
- BiG-MEx implementation as Docker images and R packages☆13Updated 3 years ago
- Functional Analysis of Metagenomes by Likelihood Inference☆17Updated 5 years ago
- PanGenomePipeline☆16Updated last year
- Influenza genome analysis Nextflow workflow☆26Updated 3 weeks ago
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆24Updated last year
- A metagenomic strategy for harnessing the chemical repertoire of the human microbiome☆32Updated last year
- ShortBRED is a pipeline to take a set of protein sequences, reduce them to a set of unique identifying strings ("markers"), and then sear…☆28Updated 3 months ago
- MinPath (Minimal set of Pathways) is a parsimony approach for biological pathway reconstructions using protein family predictions, achiev…☆21Updated 3 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆25Updated last year
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆32Updated 11 months ago
- Parse GFF3 into Pandas dataframes☆27Updated last year
- Toolkit for establishing, updating, and validating GTDB species clusters☆20Updated last month
- Nanopore Plasmid Sequencing☆32Updated last year
- Bacterial Annotation by Learned Representation of Genes☆55Updated 4 years ago
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆35Updated 4 years ago
- ☆23Updated 5 years ago
- Computational workflows for metagenomics tasks, by the Bhatt lab☆47Updated 2 years ago