jic-dtool / dtool
Manage scientific data
☆16Updated 2 months ago
Related projects: ⓘ
- A Snakemake executor plugin for submitting jobs to a SLURM cluster☆14Updated last week
- Generate a CFF file using the metadata from a software release on Zenodo.☆22Updated last year
- Galaxy Docker repository with Imaging tools (Galaxy Imaging flavour)☆12Updated 5 years ago
- Command line tool to analyze a GitHub or GitLab repository's compliance with the fair-software.eu recommendations☆54Updated 2 months ago
- A simple native R reader for Zarr Arrays☆31Updated last week
- ☆22Updated 2 months ago
- Command-line utilities to manage JOSS submissions. May one day be a sentient being.☆25Updated 5 months ago
- Metabolomics experimental design, sample metadata configuration, and sample data acquisition.☆9Updated 6 years ago
- ☆65Updated last year
- Benchmarking and metadata tracking for Python. Extensible, with distributed/cluster support.☆16Updated last month
- Light-weight Jupyter notebook tracker.☆34Updated last month
- A Python package template that supports the pyOpenSci pure Python packaging tutorial☆14Updated 9 months ago
- Jenkins for Life Science Continuous Integration☆12Updated 7 years ago
- A web app for exploratory data analysis of high-throughput screens (HTS)☆17Updated 6 years ago
- A toolkit to define the skills, competencies and diverse progression pathways for RSEs to help track and manage their professional profil…☆30Updated last week
- A Python package for generating and working with codemeta☆25Updated 3 months ago
- Galaxy tools for image analysis☆14Updated last month
- Open Computational Inclusion and Digital Equity Resource☆16Updated last year
- Manuscript describing open collaborative writing with Manubot☆48Updated 4 years ago
- Summary of the Carpentries pedagogic model and some lesson ideas from the community☆13Updated 4 years ago
- Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client☆16Updated 11 months ago
- Requests for comment for technology changes and other issues affecting lesson Maintainers.☆18Updated 2 years ago
- An example GitHub Action (CI) to build a Singularity container☆66Updated last year
- Python utilities for CWL☆35Updated last week
- Ten Simple Rules for Writing Dockerfiles for Reproducible Data Science☆62Updated 3 years ago
- Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data☆16Updated last year
- SODAR: System for Omics Data Access and Retrieval☆14Updated this week
- Material for UK RSE 2022 Conference Walkthrough on MLOps for RSEs☆15Updated last year
- Learn Deep Learning with Python☆30Updated last week
- Information and ideas for CarpentryCon☆20Updated last month