GlastonburyC / RNAPath
Self-supervised representation learning combining GTEx histology, RNA-seq and WGS
☆29Updated last month
Alternatives and similar repositories for RNAPath
Users that are interested in RNAPath are comparing it to the libraries listed below
Sorting:
- SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention☆41Updated last month
- ☆33Updated 4 months ago
- DeepSpot: Leveraging Spatial Context for Enhanced Spatial Transcriptomics Prediction from H&E Images☆44Updated this week
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆54Updated last year
- ☆12Updated 8 months ago
- The Single-Cell Pathology Landscape of Breast Cancer☆26Updated 5 years ago
- Her2 Breast Cancer Project☆73Updated 2 years ago
- ☆40Updated 3 years ago
- Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning☆76Updated 6 months ago
- Morphology-Enhanced Spatial Transcriptome Analysis Integrator☆25Updated 2 months ago
- ☆15Updated last month
- ☆10Updated last week
- Sub-cellular spatial transcriptomics Cell Segmentation☆66Updated last year
- Deep learning on histopathology images.☆120Updated 3 years ago
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆76Updated 4 years ago
- Scripts for data processing☆43Updated 11 months ago
- deep learning pipeline repository for the paper "Geospatial immune variability illuminates differential evolution of lung adenocarcinoma…☆52Updated 4 years ago
- MUSE is a deep learning approach characterizing tissue composition through combined analysis of morphologies and transcriptional states f…☆34Updated 3 years ago
- ☆54Updated 2 years ago
- ☆32Updated last month
- Reproducing the experiments of the DestVI paper☆18Updated 3 years ago
- ☆11Updated 2 years ago
- Code for paper "A deep profile of gene expression across 18 human cancers"☆24Updated 5 months ago
- ☆35Updated last year
- A pan-cancer platform for mutation prediction from routine histology☆68Updated 3 years ago
- Super-resolved spatial transcriptomics by deep data fusion☆73Updated 2 years ago
- ☆22Updated 2 years ago
- Code for ST_IGI package☆25Updated 6 months ago
- ☆130Updated 4 months ago
- ☆34Updated 3 years ago