☆167Dec 20, 2024Updated last year
Alternatives and similar repositories for istar
Users that are interested in istar are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Super-resolved spatial transcriptomics by deep data fusion☆74Mar 30, 2023Updated 3 years ago
- Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning☆86Oct 22, 2024Updated last year
- Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA☆66Mar 18, 2024Updated 2 years ago
- Spatial Transcriptomic Analysis using Reference-Free auxiliarY deep generative modeling and Shared Histology☆132May 29, 2025Updated last year
- ☆25Apr 3, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆61Apr 26, 2022Updated 4 years ago
- Her2 Breast Cancer Project☆102Nov 27, 2022Updated 3 years ago
- Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)☆445Jun 2, 2026Updated last month
- ☆13Sep 30, 2024Updated last year
- A Transformer Model Exploiting Histology Images and Spatial Gene Expression☆22Mar 18, 2025Updated last year
- ☆16Sep 29, 2023Updated 2 years ago
- ☆53Oct 9, 2025Updated 8 months ago
- Deep learning on histopathology images.☆147Sep 8, 2021Updated 4 years ago
- ☆133Jun 10, 2022Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A novel machine learning pipeline to analyse spatial transcriptomics data☆252Jun 28, 2026Updated last week
- CeLEry: cell location recovery in single-cell RNA sequencing☆38Feb 14, 2025Updated last year
- Morphology-Enhanced Spatial Transcriptome Analysis Integrator☆27Mar 16, 2025Updated last year
- Open-ST: profile and analyze tissue transcriptomes in 3D with high resolution in your lab☆116Jul 4, 2025Updated last year
- A tool for semi-automatic cell type harmonization and integration☆120Mar 9, 2026Updated 3 months ago
- Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024☆116Oct 15, 2024Updated last year
- Scaling up spatial transcriptomics for large-sized tissues: uncovering cellular-level tissue architecture beyond conventional platforms☆49Oct 22, 2025Updated 8 months ago
- ☆37Oct 22, 2025Updated 8 months ago
- Spatial-eXpression-R: Cell type identification (including cell type mixtures) and cell type-specific differential expression for spatial …☆467Jan 22, 2026Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- BANKSY: spatial clustering☆156May 30, 2026Updated last month
- Implementation of multiplex Leiden for analysis of spatial omics data☆22May 7, 2026Updated 2 months ago
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆29Sep 6, 2024Updated last year
- ☆71Sep 16, 2025Updated 9 months ago
- a computational framework to identify and characterize cell niches from spatial omics data at single-cell resolution☆54Aug 11, 2025Updated 10 months ago
- ☆33May 4, 2025Updated last year
- CAST package☆44Oct 26, 2024Updated last year
- ☆139Jun 25, 2026Updated last week
- CytoSPACE: Optimal mapping of scRNA-seq data to spatial transcriptomics data☆149Feb 20, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆20Apr 8, 2025Updated last year
- Self-supervised representation learning combining GTEx histology, RNA-seq and WGS☆34Apr 9, 2025Updated last year
- SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph con…☆263Feb 9, 2026Updated 4 months ago
- ☆13Feb 24, 2025Updated last year
- Associated code to the manuscript "Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using h…☆117Jun 9, 2025Updated last year
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆15Nov 9, 2023Updated 2 years ago
- Patho-DBiT is a platform to spatially decode RNA Biology in archival FFPE tissues.☆16Aug 15, 2024Updated last year