Code for preparing and running the imageCCA method.
☆20Aug 2, 2017Updated 9 years ago
Alternatives and similar repositories for imageCCA
Users that are interested in imageCCA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Programming for Biology @ CSHL 2023☆14Oct 17, 2025Updated 9 months ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Oct 6, 2023Updated 2 years ago
- Extract the Ensembl genes catalog to simple tables☆18Dec 22, 2025Updated 7 months ago
- Self-supervised representation learning combining GTEx histology, RNA-seq and WGS☆34Apr 9, 2025Updated last year
- tests for statistical significance of clustering☆38Nov 21, 2018Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Bayesian group factor model with structured sparsity☆22Jan 6, 2016Updated 10 years ago
- ggCorpIdent: A package for ggplot2 graphics in corporate design with custom fonts, colors and logo.☆13Apr 4, 2019Updated 7 years ago
- Automatic quality control for FASTQ sequencing files☆13Feb 27, 2018Updated 8 years ago
- Pipeline for computational pathology☆43Jan 4, 2024Updated 2 years ago
- Multi-study integration of cellular trajectories☆19Jun 1, 2020Updated 6 years ago
- Code for training and evaluating AI-ECG models☆17Sep 12, 2023Updated 2 years ago
- developmental cortical propagation detection + analyses☆10Jan 16, 2023Updated 3 years ago
- SPATA Package for spatial gene expression analysis☆21May 6, 2022Updated 4 years ago
- My setup and config files.☆18Aug 18, 2017Updated 8 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Analysis of the MoTrPAC endurance exercise training study in 6-month-old rats☆13Sep 30, 2024Updated last year
- A package, and script, to perform imaging transcriptomics on a neuroimaging scan.☆16Jul 1, 2024Updated 2 years ago
- Benchmarking toolkit for patch-based histopathology image classification.☆44Jun 2, 2023Updated 3 years ago
- RILseq computational protocol☆10Apr 3, 2022Updated 4 years ago
- ☆11Jul 8, 2024Updated 2 years ago
- Developments in next generation sequencing: instruments, read lengths, throughput. See☆26Apr 2, 2018Updated 8 years ago
- A Toolset for Chromosome X-Wide Association Studies☆13May 1, 2018Updated 8 years ago
- An R package for detecting Gene-by-Environment (GxE) interaction effects on the transcriptome using Allele Specific Expression quantified…☆22Oct 27, 2021Updated 4 years ago
- High-dimensional statistics with R☆11May 26, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- slideToolkit: a free toolset for analyzing full size virtual histology slides☆11May 22, 2024Updated 2 years ago
- Snakemake pipeline for plate scATAC-seq processing☆26Dec 7, 2023Updated 2 years ago
- Python package for cancer early detection based on a model of cancer evolution and circulating tumor DNA (ctDNA) shedding☆13Jan 8, 2021Updated 5 years ago
- Accurate encoding of histologic images into StyleGAN space for discovery and explainability☆13Oct 8, 2025Updated 10 months ago
- A new extended cell deconvolution for peripheral blood☆19Feb 28, 2025Updated last year
- This repository provides the AJIVE software in Matlab and all related Matlab scripts to reproduce the results in the paper Angle-basied J…☆12May 10, 2018Updated 8 years ago
- ☆11Dec 17, 2025Updated 7 months ago
- Code, data and analysis for moslin.☆15Oct 7, 2024Updated last year
- Code & utilities for the manuscript "Lineage Recording Reveals the Phylodynamics, Plasticity and Paths of Tumor Evolution"☆14May 27, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Toolbox for fMRI and TMS☆22Dec 1, 2024Updated last year
- Yet another LLM command line interface☆16Dec 9, 2024Updated last year
- Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue image…☆58May 8, 2024Updated 2 years ago
- ☆17Mar 6, 2024Updated 2 years ago
- ☆14Jun 21, 2021Updated 5 years ago
- Integrative clustering for heterogeneous biomedical datasets.☆16May 4, 2020Updated 6 years ago
- Code for reproducing the Sei manuscript results☆17Jan 25, 2022Updated 4 years ago