SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention
☆50Mar 24, 2026Updated 2 months ago
Alternatives and similar repositories for sequoia-pub
Users that are interested in sequoia-pub are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code for the THItoGene☆28Apr 9, 2025Updated last year
- A unified interface to spatial transcriptomics deconvolution tools☆47Apr 6, 2026Updated last month
- ☆37Oct 11, 2024Updated last year
- Containerized cancer subtype prediction tools for gene expression, miRNA, DNA methylation, somatic mutations and copy number variation.☆36Apr 9, 2025Updated last year
- ☆49May 18, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆69Sep 16, 2025Updated 8 months ago
- Repository in Support of EAGLE Submission☆23Oct 11, 2025Updated 7 months ago
- Cell-type Relationship Analysis Workflow Done Across Distances☆41Nov 18, 2025Updated 6 months ago
- Self-supervised representation learning combining GTEx histology, RNA-seq and WGS☆34Apr 9, 2025Updated last year
- DeepSpot: Deep learning model for predicting spatial transcriptomics from H&E histopathology images. Supports spot-level (Visium) and sin…☆70Updated this week
- Scripts used to perform the analyses to study the Biology of Myeloid Cells in Glioma Microenvironments☆24May 13, 2025Updated last year
- ☆56Mar 28, 2025Updated last year
- An interpretable and flexible deep learning framework for single-T cell transcriptome and receptor analysis☆15Apr 5, 2025Updated last year
- Accurate spatial quantification in computational pathology with multiple instance learning☆31Nov 19, 2025Updated 6 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Standardized benchmark for computational pathology foundation models.☆142Nov 7, 2025Updated 6 months ago
- Train a model to predict gene expression from histology slides.☆112Jul 6, 2022Updated 3 years ago
- QuST: QuPath Extension for Integrative Whole Slide Image and Spatial Transcriptomics Analysis☆34Jun 22, 2025Updated 11 months ago
- Gain biological insights using LLM.☆15Jan 26, 2026Updated 3 months ago
- A Vision-Language Benchmark for Microscopy Understanding☆31Mar 13, 2025Updated last year
- Detect hierarchical structures in cell-cell communications☆16Jan 26, 2025Updated last year
- [ICLR 2025] Stem: Gene Expression Inference from Histology Images☆50Apr 15, 2025Updated last year
- Tutorial repository for the official MOTOR release☆16Feb 22, 2025Updated last year
- ☆12Sep 25, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Pan-Cancer Integrative Histology-Genomic Analysis via Multimodal Deep Learning - Cancer Cell☆244Feb 7, 2023Updated 3 years ago
- ☆55Apr 26, 2022Updated 4 years ago
- A multi-instance learning on pathological images to predict MSI☆14Sep 30, 2020Updated 5 years ago
- ☆27Apr 29, 2026Updated 3 weeks ago
- Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning☆86Oct 22, 2024Updated last year
- Accurate encoding of histologic images into StyleGAN space for discovery and explainability☆13Oct 8, 2025Updated 7 months ago
- ☆163Dec 20, 2024Updated last year
- ☆18Nov 24, 2024Updated last year
- ☆16Oct 1, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Workflows for health technology Assessments in R using Discrete EveNts☆12Updated this week
- [AAAI 2025] M2OST: Many-to-one Regression for Predicting Spatial Transcriptomics from Digital Pathology Images☆14Dec 1, 2025Updated 5 months ago
- ☆28Jun 4, 2023Updated 2 years ago
- A visual–omics foundation model to bridge histopathology with spatial transcriptomics☆139Jun 3, 2025Updated 11 months ago
- ☆22Feb 5, 2025Updated last year
- Deep learning on histopathology images.☆145Sep 8, 2021Updated 4 years ago
- A collection of perl scripts for NGS analysis☆17Oct 2, 2024Updated last year