Finds DAMEs - Differential Allelicly MEthylated regions
☆10Jul 29, 2025Updated 9 months ago
Alternatives and similar repositories for DAMEfinder
Users that are interested in DAMEfinder are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- methtuple is a methylation caller for methylation events that co-occur on the same DNA fragment from high-throughput bisulfite sequencing…☆16Apr 5, 2022Updated 4 years ago
- Reanalysis of the repressive capacity of promoter DNA methylation☆11Feb 14, 2019Updated 7 years ago
- Machine learning workshop materials☆15Nov 19, 2024Updated last year
- An information-theoretic pipeline for methylation analysis of WGBS data☆24Apr 9, 2019Updated 7 years ago
- ☆22Dec 17, 2020Updated 5 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Copy Number Variation Detection In Next-generation sequencing Gene panels was designed for small (single-exon) copy number variation (CNV…☆21Jun 30, 2020Updated 5 years ago
- HOT regions paper☆11Jun 18, 2019Updated 6 years ago
- A Beginner's Guide to State Space Modeling☆30Nov 25, 2025Updated 5 months ago
- A pipeline for analyzing DNA methylation data from bisulfite sequencing.☆71Oct 7, 2022Updated 3 years ago
- R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing☆63May 9, 2025Updated 11 months ago
- IMGT segment library converted to RepSeq.IO JSON format☆13Mar 21, 2023Updated 3 years ago
- A collection of tools to deal with Bisulfite-seq/NOMe-seq (SNP/Methylation calling: BisSNP; HMM segmentation: DMNTools; Visualization/Clu…☆32Nov 10, 2021Updated 4 years ago
- Single nucleotide variant (SNV) detection and genotyping algorithm for single-cell DNA sequencing data☆14May 8, 2020Updated 6 years ago
- Immune Profiling of Atherosclerotic Plaques Identifies☆10Sep 18, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methyl…☆49Oct 10, 2023Updated 2 years ago
- R package: determining cutoff values from bimodal data☆11Mar 17, 2024Updated 2 years ago
- Preprocessing sequencing data for allele-specific analysis☆13Mar 11, 2025Updated last year
- Self-supervised representation learning combining GTEx histology, RNA-seq and WGS☆34Apr 9, 2025Updated last year
- ☆13Oct 2, 2019Updated 6 years ago
- Interactive benchmarking of ranking and assignment methods☆16Apr 28, 2026Updated last week
- Create Regional Association Plots☆13Sep 7, 2025Updated 8 months ago
- ☆15Apr 8, 2026Updated last month
- ☆105Aug 26, 2025Updated 8 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Anonymous function creation in R and purrr☆14Jan 11, 2020Updated 6 years ago
- Novel joint clustering method with scRNA-seq and CITE-seq data☆10Jun 22, 2021Updated 4 years ago
- ☆12Jul 2, 2021Updated 4 years ago
- Desktop application for colouring/shading sequence alignments☆29Jan 22, 2023Updated 3 years ago
- Python module and utility programs for working with GFF files☆33Nov 25, 2020Updated 5 years ago
- Software to infer latent pleiotropic components from GWAS summary data☆16Jan 30, 2025Updated last year
- A whole genome bisulfite sequencing (WGBS) pipeline for the alignment and QC of DNA methylation that goes from from raw reads (FastQ) to …☆24Mar 28, 2022Updated 4 years ago
- ☆11Jul 8, 2024Updated last year
- Pipeline for generating RNAseq-based cancer patient reports☆12Apr 15, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- CNV detection tool for targeted NGS panel data☆16Feb 28, 2022Updated 4 years ago
- A Toolset for Chromosome X-Wide Association Studies☆13May 1, 2018Updated 8 years ago
- RIESLING: Super-enhancer identification. (Rapid Identification of EnhancerS LInked to Nearby Genes)☆10Jun 28, 2018Updated 7 years ago
- cEll tyPe enrIChment☆16Dec 11, 2022Updated 3 years ago
- An accurate and efficient colocalization method accounting for multiple causal signals☆13Jun 3, 2024Updated last year
- ☆12Jun 28, 2024Updated last year
- slideToolkit: a free toolset for analyzing full size virtual histology slides☆11May 22, 2024Updated last year