STOmics / StereoMMv1
StereoMM is a graph fusion model that can integrate gene expression, histological images, and spatial location. And the information interaction within modalities is strengthened by introducing an attention mechanism.
☆31Updated 6 months ago
Alternatives and similar repositories for StereoMMv1:
Users that are interested in StereoMMv1 are comparing it to the libraries listed below
- SPROD: Spatial expression profiling de-noising☆35Updated last year
- Awesome list of tools and methods to perform spatial transcriptomic data analysis.☆39Updated 3 years ago
- Spatial Cellular Estimator for Tumors☆47Updated this week
- ☆52Updated 6 months ago
- ☆27Updated last year
- Spatial Transcriptomic Analysis of OSCC samples☆23Updated last year
- CeLEry: cell location recovery in single-cell RNA sequencing☆33Updated last week
- ☆37Updated 2 years ago
- ☆18Updated 3 years ago
- MeDuSA is a fine-resolution cellular deconvolution method that leverages scRNA-seq data as a reference to estimate cell-state abundance i…☆41Updated this week
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆28Updated last year
- domain adaptation of spatial and single-cell transcriptome☆25Updated 5 months ago
- Spatial transcriptome analysis in python☆22Updated 3 weeks ago
- inferring regulatory cellular dynamics☆34Updated last month
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆42Updated last year
- Axolotl Regenerative Telencehpalon Interpretation via Spatiotemporal Transcriptomic Atlas☆18Updated 2 years ago
- Bayesian Analytics for Spatial Segmentation☆25Updated 4 months ago
- Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq☆11Updated 10 months ago
- A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative mod…☆21Updated last month
- ☆17Updated 2 years ago
- Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…☆39Updated 3 years ago
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆33Updated 7 months ago
- Predict RNA velocity through deep learning☆66Updated last year
- ☆17Updated 5 months ago
- ☆10Updated last year
- ☆12Updated 2 years ago
- ☆44Updated 9 months ago
- ☆31Updated last year
- UniCell Deconvolve Paper☆10Updated last year
- Single cell omics biology annotations☆49Updated 3 weeks ago