STOmics / StereoMMv1
StereoMM is a graph fusion model that can integrate gene expression, histological images, and spatial location. And the information interaction within modalities is strengthened by introducing an attention mechanism.
☆31Updated 7 months ago
Alternatives and similar repositories for StereoMMv1:
Users that are interested in StereoMMv1 are comparing it to the libraries listed below
- Spatial Transcriptomic Analysis of OSCC samples☆23Updated last year
- Axolotl Regenerative Telencehpalon Interpretation via Spatiotemporal Transcriptomic Atlas☆18Updated 2 years ago
- SPROD: Spatial expression profiling de-noising☆36Updated last year
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆43Updated last year
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆28Updated last year
- Spatial Cellular Estimator for Tumors☆51Updated 2 weeks ago
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆30Updated last year
- A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative mod…☆21Updated 2 months ago
- ☆27Updated last year
- Probabilistic Alignment of Spatial Transcriptomics Experiments v.2☆34Updated 3 weeks ago
- ☆38Updated 2 years ago
- domain adaptation of spatial and single-cell transcriptome☆26Updated 6 months ago
- Awesome list of tools and methods to perform spatial transcriptomic data analysis.☆40Updated 3 years ago
- R implementation of GeneTrajectory☆56Updated 11 months ago
- Spatial transcriptomics of heart tissue☆20Updated 2 years ago
- ☆17Updated 2 years ago
- Spatial transcriptome analysis in python☆22Updated last month
- Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics☆33Updated last week
- Code for the spatial transcriptomic paper on IPF lungs☆14Updated 8 months ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆34Updated 4 years ago
- ☆45Updated last week
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆27Updated last year
- Collection of scripts for analysis of pan fetal immune atlas☆26Updated 2 years ago
- ☆17Updated 2 years ago
- ☆41Updated last year
- Single cell omics biology annotations☆50Updated 2 weeks ago
- ☆19Updated 7 months ago
- ☆18Updated 3 years ago
- Predict RNA velocity through deep learning☆66Updated last year
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆24Updated last month