SpielmannLab / STIGMALinks
☆10Updated last week
Alternatives and similar repositories for STIGMA
Users that are interested in STIGMA are comparing it to the libraries listed below
Sorting:
- ☆16Updated last year
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated 2 months ago
- A single-cell and spatial RNA-seq database for Alzheimer’s Disease☆26Updated last year
- model-based understanding of single-cell CRISPR screening☆25Updated 10 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆28Updated 3 years ago
- Inference of TCR motifs☆32Updated 4 months ago
- ☆20Updated 3 weeks ago
- ☆60Updated last year
- An R/Bioconductor package to identify higher-order molecular phenotypes☆19Updated last year
- ☆57Updated last year
- ☆44Updated last year
- Beyondcell is a computational methodology for identifying tumour cell subpopulations with distinct drug responses in single-cell RNA-seq …☆54Updated last year
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆30Updated 5 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 8 months ago
- Easy and comprehensive biological network reconstruction and analysis☆33Updated last month
- ☆15Updated 2 years ago
- Molecular interactions inference from single-cell multi-omics data☆27Updated 2 weeks ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆14Updated 2 years ago
- A modular tool for proportion analysis in single-cell sequencing data☆23Updated last month
- iterative clustering pipeline of big single cell datasets.☆34Updated 2 months ago
- Projecting RNA measurements onto single cell atlases to extract cell type-specific expression profiles using scProjection☆16Updated 2 years ago
- tumor - cancer cell line alignment. Use it on the depmap portal or install it with pip.☆11Updated last year
- ACTIONet single-cell analysis framework☆43Updated last year
- ☆31Updated 8 months ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last year
- Code related to the Celligner manuscript☆46Updated 5 years ago
- Hotspot cluster distance analysis in spatial transcriptomic data☆33Updated 8 months ago
- Materials and scripts for building cell type encyclopedia table☆20Updated 3 weeks ago
- Mapping the Functional Landscape of TCR Repertoire☆35Updated 4 years ago
- ☆26Updated 5 months ago