☆10Dec 17, 2025Updated 3 months ago
Alternatives and similar repositories for STIGMA
Users that are interested in STIGMA are comparing it to the libraries listed below
Sorting:
- a computational framework to identify and characterize cell niches from spatial omics data at single-cell resolution☆50Aug 11, 2025Updated 7 months ago
- This package contains the BLAST Viewer Tool.☆13Apr 7, 2023Updated 2 years ago
- A Quality Control filter and parser for NCBI BLAST XML results.☆17Aug 21, 2020Updated 5 years ago
- PlaNet: Predicting population response to drugs via clinical knowledge graph☆33Mar 13, 2025Updated last year
- Bayesian Analytics for Spatial Segmentation☆30May 4, 2025Updated 10 months ago
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆11May 31, 2024Updated last year
- methylR: a single shiny solution from sequencer data to pathway analysis☆12Oct 30, 2024Updated last year
- ☆15Dec 8, 2023Updated 2 years ago
- Self-supervised representation learning combining GTEx histology, RNA-seq and WGS☆34Apr 9, 2025Updated 11 months ago
- Clustering the NCBI nr database with mmseq2 (90% length, 90% identity). Inspired by the NCBI's experimental ClusteredNR database.☆23Nov 7, 2025Updated 4 months ago
- Antibody-Specific Epitope Mapping☆17Sep 10, 2025Updated 6 months ago
- Genotyping Immunoglobulin Heavy Chain Variable Genes using Short Read Data☆12May 9, 2025Updated 10 months ago
- ☆30Oct 4, 2024Updated last year
- ALD study data analysis☆13Feb 16, 2023Updated 3 years ago
- GWAS genetics Fine-mapping method☆17May 17, 2024Updated last year
- ☆17May 5, 2020Updated 5 years ago
- An automated workflow to create disease-specific Knowledge Graphs☆19Aug 21, 2025Updated 6 months ago
- ☆44May 16, 2025Updated 10 months ago
- An online database of variants functionally demonstrated to affect (or not affect) splicing.☆11Mar 20, 2025Updated last year
- Implement different variants of gradient descent in python using numpy☆11Apr 23, 2019Updated 6 years ago
- The complete sequence of a Chinese individual☆11Oct 8, 2024Updated last year
- ☆12May 2, 2025Updated 10 months ago
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆17Apr 20, 2024Updated last year
- development of network co-localization tool☆14Mar 2, 2026Updated 2 weeks ago
- Code to reproduce analyses in Nasser, Bergman, Fulco, Guckelberger, Doughty et al Nature 2021☆16Apr 8, 2021Updated 4 years ago
- Feature map and function annotation of Proteins☆34Jun 13, 2024Updated last year
- Bayesian network modelling of mutational interactions identifies novel cancer subgroups☆15May 10, 2021Updated 4 years ago
- the MAVISp database for annotations and predictions of variant effects at the protein level☆13Feb 19, 2026Updated last month
- ☆19Jul 28, 2025Updated 7 months ago
- Software to process, statistically analyse and visualise deep mutational scanning data☆14Oct 29, 2025Updated 4 months ago
- NAguideR: performing and prioritizing missing value imputations for consistent bottom-up proteomic analyses☆51Aug 12, 2025Updated 7 months ago
- Network-based module discovery algorithm with high rate of empirically-validated term calls☆14Oct 22, 2023Updated 2 years ago
- Data Integration tool utilizing network information for predictive analyses☆16May 15, 2025Updated 10 months ago
- A unified interface to spatial transcriptomics deconvolution tools☆45Feb 15, 2026Updated last month
- This R package for performing module repertoire analyses and generating fingerprint representations☆18Sep 16, 2021Updated 4 years ago
- Website with learning materials / Stránka s učebními materiály☆14Sep 1, 2022Updated 3 years ago
- A positive-unlabeled ensemble learning framework for disease gene prioritization.☆20Nov 10, 2025Updated 4 months ago
- Implementation of multiplex Leiden for analysis of spatial omics data☆17Feb 2, 2026Updated last month
- ☆11Oct 4, 2021Updated 4 years ago