Valeyards / ProgPathLinks
Pan-cancer outcome prediction via a unified weakly supervised deep learning model
☆21Updated last month
Alternatives and similar repositories for ProgPath
Users that are interested in ProgPath are comparing it to the libraries listed below
Sorting:
- Exploring prognostic indicators in pathological images of hepatocellular carcinoma based on deep learning☆45Updated 4 years ago
- Code from Foersch et al. (Under Construction / Development)☆37Updated 2 years ago
- ☆56Updated 2 years ago
- Code for the im4MEC model described in the paper 'Interpretable deep learning model to predict the molecular classification of endometria…☆51Updated last year
- ☆101Updated last year
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆44Updated 10 months ago
- sc-MTOP is an analysis framework based on deep learning and computational pathology. This framework aims to characterize the tumor ecosys…☆43Updated 5 months ago
- Python library for processing whole slide images (WSIs) in sdpc format☆60Updated 9 months ago
- Scripts for data processing☆48Updated last year
- First commit☆63Updated 3 years ago
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆32Updated last year
- A pan-cancer platform for mutation prediction from routine histology☆69Updated 4 years ago
- A Trained Network for Histopathology Image Representation☆20Updated last year
- ☆15Updated 8 months ago
- ☆27Updated last year
- Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch☆24Updated 2 years ago
- machine-readable information for the TCGA dataset, mirrored from other sources☆21Updated 3 years ago
- ☆57Updated 3 years ago
- Radiopathomics: a framework of fusing multi-scale images information to enrich description of tumor heterogeneity for LARC patients prior…☆22Updated 4 years ago
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆83Updated last year
- Histopathology Image Analysis☆92Updated 2 years ago
- A generative toolkit to translate H&E images to multiplexed IHC☆55Updated 10 months ago
- Tools to build deep learning pipelines.☆110Updated 11 months ago
- Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for dee…☆56Updated 10 months ago
- A transformer-based weakly supervised computational pathology method for clinical-grade diagnosis and molecular state revelation of gliom…☆37Updated 10 months ago
- Accurate encoding of histologic images into StyleGAN space for discovery and explainability☆13Updated 3 weeks ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆73Updated 9 months ago
- This repository contains the implementation of TILAb-score as described in the original paper.☆18Updated 6 years ago
- This repo provides the pipeline of processing TCGA whole-slide images for downstream pathology analysis.☆79Updated 7 months ago
- GrandQC tool for tissue detection and quality control in pathology☆71Updated 7 months ago