☆69Sep 16, 2025Updated 7 months ago
Alternatives and similar repositories for GHIST
Users that are interested in GHIST are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆65Feb 11, 2026Updated 2 months ago
- ☆56Mar 28, 2025Updated last year
- Code for the THItoGene☆28Apr 9, 2025Updated last year
- ☆16Oct 1, 2023Updated 2 years ago
- ☆54Apr 26, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Deep learning on histopathology images.☆145Sep 8, 2021Updated 4 years ago
- SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention☆50Mar 24, 2026Updated last month
- ☆13May 28, 2025Updated 11 months ago
- a computational framework to identify and characterize cell niches from spatial omics data at single-cell resolution☆53Aug 11, 2025Updated 8 months ago
- CellLENS: Cross-domain information fusion for enhanced cell population delineation in single-cell spatial-omics data☆35Jul 24, 2025Updated 9 months ago
- Histopathology Feature Extractors (2024)☆14Jun 14, 2024Updated last year
- A package that performs cell type annotations on single cell resolution of spatial transcriptomics data, find the niche interactions and …☆14Dec 5, 2025Updated 4 months ago
- Self-supervised representation learning combining GTEx histology, RNA-seq and WGS☆34Apr 9, 2025Updated last year
- ☆20Apr 8, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆50May 19, 2025Updated 11 months ago
- ☆16Jul 8, 2024Updated last year
- ☆21Jul 7, 2025Updated 9 months ago
- Lightweight pipeline for processing droplet-based single-cell RNA-seq data☆18Nov 4, 2020Updated 5 years ago
- StereoMM is a graph fusion model that can integrate gene expression, histological images, and spatial location. And the information inter…☆39Dec 23, 2025Updated 4 months ago
- Sub-cellular spatial transcriptomics Cell Segmentation☆70Oct 1, 2023Updated 2 years ago
- DeeperHistReg - Source Code☆96Apr 26, 2024Updated 2 years ago
- ☆14Jan 23, 2026Updated 3 months ago
- ☆161Dec 20, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- The source code for "High-Parameter Spatial Multi-Omics through Histology-Anchored Integration"☆34Updated this week
- MorphLink: Bridging Cellular Morphological Behaviors and Molecular Dynamics in Multi-modal Spatial Omics☆17Dec 7, 2025Updated 4 months ago
- ☆23Nov 25, 2025Updated 5 months ago
- Assembly and Annotation of the Human Immune Health Atlas☆24Aug 28, 2025Updated 8 months ago
- A visual–omics foundation model to bridge histopathology with spatial transcriptomics☆137Jun 3, 2025Updated 10 months ago
- ☆70Jul 15, 2022Updated 3 years ago
- Exemplar Guided Deep Neural Network for Spatial Transcriptomics Analysis of Gene Expression Prediction☆20Oct 20, 2023Updated 2 years ago
- ☆21Jan 20, 2026Updated 3 months ago
- This repository provides the dataset HEMIT for H&E to mIHC image-to-image translation task☆22Dec 11, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- [ECCV'24] cDP-MIL: Robust Multiple Instance Learning via Cascaded Dirichlet Process☆17Sep 10, 2024Updated last year
- BEiT-based model Pre-training on Histopathological image☆73Mar 24, 2025Updated last year
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆66Mar 14, 2024Updated 2 years ago
- GPU-accelerated Stain Normalization and Augmentation in PyTorch☆43Feb 10, 2026Updated 2 months ago
- 3D segmentation for cells and organoids of 3D multichannel images☆32Jun 24, 2025Updated 10 months ago
- DeepSpot: Deep learning model for predicting spatial transcriptomics from H&E histopathology images. Supports spot-level (Visium) and sin…☆66Apr 20, 2026Updated last week
- ☆50Jan 7, 2025Updated last year