☆66Sep 16, 2025Updated 6 months ago
Alternatives and similar repositories for GHIST
Users that are interested in GHIST are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆50Feb 11, 2026Updated last month
- ☆55Mar 28, 2025Updated 11 months ago
- Code for the THItoGene☆28Apr 9, 2025Updated 11 months ago
- ☆16Oct 1, 2023Updated 2 years ago
- ☆54Apr 26, 2022Updated 3 years ago
- Deep learning on histopathology images.☆142Sep 8, 2021Updated 4 years ago
- SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention☆49Jun 4, 2025Updated 9 months ago
- ☆14May 28, 2025Updated 9 months ago
- a computational framework to identify and characterize cell niches from spatial omics data at single-cell resolution☆51Aug 11, 2025Updated 7 months ago
- CellLENS: Cross-domain information fusion for enhanced cell population delineation in single-cell spatial-omics data☆34Jul 24, 2025Updated 7 months ago
- Histopathology Feature Extractors (2024)☆13Jun 14, 2024Updated last year
- A package that performs cell type annotations on single cell resolution of spatial transcriptomics data, find the niche interactions and …☆14Dec 5, 2025Updated 3 months ago
- Self-supervised representation learning combining GTEx histology, RNA-seq and WGS☆34Apr 9, 2025Updated 11 months ago
- ☆19Apr 8, 2025Updated 11 months ago
- ☆49May 19, 2025Updated 10 months ago
- ☆16Jul 8, 2024Updated last year
- ☆21Jul 7, 2025Updated 8 months ago
- Lightweight pipeline for processing droplet-based single-cell RNA-seq data☆18Nov 4, 2020Updated 5 years ago
- StereoMM is a graph fusion model that can integrate gene expression, histological images, and spatial location. And the information inter…☆39Dec 23, 2025Updated 3 months ago
- Sub-cellular spatial transcriptomics Cell Segmentation☆70Oct 1, 2023Updated 2 years ago
- This repository provides the dataset HEMIT for H&E to mIHC image-to-image translation task☆17Dec 11, 2024Updated last year
- ☆161Dec 20, 2024Updated last year
- DeeperHistReg - Source Code☆95Apr 26, 2024Updated last year
- ☆14Jan 23, 2026Updated 2 months ago
- A visual–omics foundation model to bridge histopathology with spatial transcriptomics☆131Jun 3, 2025Updated 9 months ago
- The source code for "High-Parameter Spatial Multi-Omics through Histology-Anchored Integration"☆29Jan 24, 2026Updated last month
- MorphLink: Bridging Cellular Morphological Behaviors and Molecular Dynamics in Multi-modal Spatial Omics☆16Dec 7, 2025Updated 3 months ago
- ☆19Nov 25, 2025Updated 3 months ago
- Assembly and Annotation of the Human Immune Health Atlas☆20Aug 28, 2025Updated 6 months ago
- ☆70Jul 15, 2022Updated 3 years ago
- ☆19Jan 20, 2026Updated 2 months ago
- Exemplar Guided Deep Neural Network for Spatial Transcriptomics Analysis of Gene Expression Prediction☆19Oct 20, 2023Updated 2 years ago
- BEiT-based model Pre-training on Histopathological image☆69Mar 24, 2025Updated 11 months ago
- [ECCV'24] cDP-MIL: Robust Multiple Instance Learning via Cascaded Dirichlet Process☆17Sep 10, 2024Updated last year
- GPU-accelerated Stain Normalization and Augmentation in PyTorch☆41Feb 10, 2026Updated last month
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆64Mar 14, 2024Updated 2 years ago
- DeepSpot: Deep learning model for predicting spatial transcriptomics from H&E histopathology images. Supports spot-level (Visium) and sin…☆66Mar 16, 2026Updated last week
- 3D segmentation for cells and organoids of 3D multichannel images☆30Jun 24, 2025Updated 8 months ago
- ☆20Jul 2, 2023Updated 2 years ago