SydneyBioX / GHISTLinks
☆12Updated last month
Alternatives and similar repositories for GHIST
Users that are interested in GHIST are comparing it to the libraries listed below
Sorting:
- ☆34Updated 5 months ago
- Biologically-informed deep learning for cell segmentation of subcelluar spatial transcriptomics data☆43Updated 11 months ago
- Her2 Breast Cancer Project☆76Updated 2 years ago
- ☆14Updated 9 months ago
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆56Updated last year
- ☆42Updated 3 years ago
- Self-supervised representation learning combining GTEx histology, RNA-seq and WGS☆29Updated 2 months ago
- Super-resolved spatial transcriptomics by deep data fusion☆74Updated 2 years ago
- ☆133Updated 6 months ago
- Sub-cellular spatial transcriptomics Cell Segmentation☆66Updated last year
- ☆12Updated 3 months ago
- Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA☆57Updated last year
- ☆55Updated 2 weeks ago
- PyTorch implementation of HisToGene☆41Updated 3 years ago
- Automate unsupervised machine learning cell type identification using both protein expressions and cell spatial neighborhood information …☆35Updated last year
- SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention☆41Updated 2 weeks ago
- A spatial omics data analysis tool that enables both unsupervised and supervised discovery of complex tissue cellular neighborhoods from …☆22Updated 2 months ago
- ☆43Updated last week
- Integrated pipeline for multiplexed image analysis☆90Updated 2 months ago
- Bayesian Analytics for Spatial Segmentation☆29Updated last month
- ☆22Updated 2 years ago
- Code for ST_IGI package☆27Updated 7 months ago
- ☆57Updated 7 months ago
- Graph-based foundation model for spatial transcriptomics data. Zero-shot spatial domain inference, batch-effect correction, and many othe…☆49Updated this week
- Code accompanying our manuscript "Coordinated cellular neighborhoods orchestrate antitumoral immunity at the colorectal cancer invasive f…☆62Updated 7 months ago
- ☆39Updated last year
- ☆36Updated last year
- Spatial cellular architecture predicts prognosis in glioblastoma - Nature Communications☆25Updated last year
- Deep learning on histopathology images.☆124Updated 3 years ago
- The Single-Cell Pathology Landscape of Breast Cancer☆26Updated 5 years ago