SydneyBioX / GHIST
☆9Updated last month
Alternatives and similar repositories for GHIST:
Users that are interested in GHIST are comparing it to the libraries listed below
- ☆12Updated 7 months ago
- Self-supervised representation learning combining GTEx histology, RNA-seq and WGS☆29Updated last week
- Biologically-informed deep learning for cell segmentation of subcelluar spatial transcriptomics data☆43Updated 9 months ago
- Sub-cellular spatial transcriptomics Cell Segmentation☆63Updated last year
- ☆123Updated 3 months ago
- ☆40Updated 2 years ago
- Super-resolved spatial transcriptomics by deep data fusion☆73Updated 2 years ago
- Her2 Breast Cancer Project☆71Updated 2 years ago
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆53Updated last year
- ☆26Updated 2 weeks ago
- SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention☆34Updated 3 weeks ago
- The Single-Cell Pathology Landscape of Breast Cancer☆26Updated 5 years ago
- CellLENS: Cross-domain information fusion for enhanced cell population delineation in single-cell spatial-omics data☆14Updated last month
- PyTorch implementation of HisToGene☆36Updated 3 years ago
- Spatial Transcriptomics Quantification pipeline for 10x Visium and H&E-stained whole slide images☆18Updated 2 months ago
- GrandQC tool for tissue detection and quality control in pathology☆38Updated last month
- ☆31Updated 3 months ago
- Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA☆53Updated last year
- TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUma…☆53Updated 2 months ago
- ☆21Updated 2 years ago
- Trained only with subject-level labels, NaroNet discovers phenotypes, neighborhoods, and areas with the highest influence when classifyin…☆15Updated last year
- Integrated pipeline for multiplexed image analysis☆86Updated 2 weeks ago
- ☆59Updated 2 months ago
- ☆34Updated last year
- Code for ST_IGI package☆24Updated 5 months ago
- Python tool for alignment of spatial transcriptomics (ST) data using diffeomorphic metric mapping☆77Updated last year
- domain adaptation of spatial and single-cell transcriptome☆26Updated 6 months ago
- Deep learning on histopathology images.☆116Updated 3 years ago
- Spatial Transcriptomic Analysis using Reference-Free auxiliarY deep generative modeling and Shared Histology☆113Updated 7 months ago
- Spatial cellular architecture predicts prognosis in glioblastoma - Nature Communications☆23Updated last year