GMOD / bam-jsLinks
Parse BAM and BAM index files in javascript for node and the browser
☆24Updated 3 weeks ago
Alternatives and similar repositories for bam-js
Users that are interested in bam-js are comparing it to the libraries listed below
Sorting:
- A python package for showing JBrowse views☆26Updated last year
- Keep Me Around: Intron Retention Detection☆29Updated 6 years ago
- a minimal, scriptable genome browser for python☆51Updated 8 months ago
- for visual evaluation of read support for structural variation☆54Updated last year
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 5 years ago
- ☆39Updated 2 months ago
- Deep learning-based structural variant filtering method☆39Updated last year
- Generic human DNA variant annotation pipeline☆58Updated last year
- Gene Fusion Visualiser☆51Updated 2 years ago
- OLD REPOSITORY - Go to☆31Updated 7 years ago
- Interactive multiscale visualization for structural variation in human genomes☆70Updated last week
- Vim syntax highlighting for WDL☆20Updated 4 years ago
- Retrieve data in genomic intervals with a Python interface for tabix.☆82Updated 8 years ago
- Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.☆40Updated 4 months ago
- Genome Contact Map Explorer - gcMapExplorer. Visit:☆21Updated 3 years ago
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆49Updated 6 years ago
- Builds a docker container wrapping higlass-server and higlass-client in nginx☆32Updated 3 years ago
- Genomic VCF to tab-separated values☆47Updated 2 years ago
- Website to analyze conflicting assertions in ClinVar☆18Updated last year
- gnomAD browser pre-ASHG 2018☆33Updated 4 years ago
- 1D/2D indexing and querying on bgzipped text file with a pair of genomic coordinates☆89Updated 7 months ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- Structural variant pipeline☆17Updated 5 years ago
- Software to assemble contigs/scaffolds into chromosomes using Hi-C data☆28Updated 11 months ago
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆44Updated 3 months ago
- Portable WDL workflows for IDseq production pipelines☆32Updated 3 years ago
- Methods for summarizing and visualizing multi-biosample functional genomic annotations☆46Updated 5 months ago
- A Perl extension and collection of utilities for Next-Generation Sequencing (NGS) data analysis☆23Updated 2 months ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- ☆29Updated 4 years ago