10XGenomics / rust-bwaLinks
Rust wrapper of the BWA C API
☆18Updated 3 months ago
Alternatives and similar repositories for rust-bwa
Users that are interested in rust-bwa are comparing it to the libraries listed below
Sorting:
- Fast FASTQ sample demultiplexing in Rust.☆64Updated 3 months ago
- bedtools-like functionality for interval sets in rust☆53Updated 3 weeks ago
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆39Updated 2 years ago
- A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust☆32Updated 7 months ago
- Bam Read Index - Extract alignments from a bam file by readname☆27Updated last year
- simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.☆44Updated 2 years ago
- Keep Me Around: Intron Retention Detection☆29Updated 6 years ago
- A better, faster way to count guides in CRISPR screens.☆33Updated 4 months ago
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆33Updated 2 months ago
- Fast and flexible tool for reading, modifying and writing biological sequences☆18Updated last month
- Quality of life improvements for Bioinformatics in Python.☆30Updated 2 weeks ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- Numerical Encoding for Human Genetic Variants☆41Updated 2 years ago
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆29Updated last year
- A tool for projecting genomic alignments to transcriptomic coordinates☆36Updated last year
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- gia: Genomic Interval Arithmetic☆65Updated last year
- Single-Cell RNA-seq pseudo-aligner☆51Updated last year
- Samwell: a python package for using genomic files... well☆20Updated 3 years ago
- Mapping-free software for fishing relevant reads in an RNA-Seq sample☆18Updated 4 years ago
- Structural Variant Prediction Viewer☆35Updated 8 years ago
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆45Updated 2 months ago
- A C library for handling bigWig files☆81Updated 7 months ago
- Single-cell analysis methods in Rust☆26Updated 2 months ago
- Rust UMI Directional Adjacency Deduplicator☆15Updated 5 years ago
- Fast interval intersection library☆43Updated last week
- Merging paired-end reads and removing adapters☆30Updated 5 years ago
- Genome-wide reconstruction of complex structural variants☆39Updated 3 years ago
- (WIP) best-practices workflow for rare disease☆60Updated last year
- Preprocessing paired-end reads produced with experiment-specific protocols☆32Updated 7 years ago