10XGenomics / rust-bwaLinks
Rust wrapper of the BWA C API
☆18Updated 8 months ago
Alternatives and similar repositories for rust-bwa
Users that are interested in rust-bwa are comparing it to the libraries listed below
Sorting:
- Fast FASTQ sample demultiplexing in Rust.☆66Updated last week
- bedtools-like functionality for interval sets in rust☆55Updated 6 months ago
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆34Updated 8 months ago
- Single-Cell RNA-seq pseudo-aligner☆52Updated last year
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆44Updated 3 months ago
- A tool for projecting genomic alignments to transcriptomic coordinates☆37Updated last year
- A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust☆32Updated 2 months ago
- sfasta☆35Updated 9 months ago
- gia: Genomic Interval Arithmetic☆66Updated last year
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆40Updated 2 years ago
- A better, faster way to count guides in CRISPR screens.☆34Updated 10 months ago
- Keep Me Around: Intron Retention Detection☆30Updated 7 years ago
- A python package for showing JBrowse views☆26Updated 2 years ago
- Genome-wide reconstruction of complex structural variants☆39Updated 3 years ago
- BigWig manpulation tools using libBigWig and htslib☆30Updated last year
- Quality of life improvements for Bioinformatics in Python.☆31Updated last week
- Fast sequencing data quality metrics☆31Updated 5 months ago
- Fast and flexible tool for reading, modifying and writing biological sequences☆17Updated last week
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆29Updated last year
- A Rust library and command line tool for working with genomic ranges and their data.☆101Updated last year
- Tools for working FASTQ files from sequencers (R1/R2/I1/I2)☆12Updated last year
- A C library for handling bigWig files☆81Updated last year
- simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.☆44Updated 2 years ago
- Convert vcf in parquet☆29Updated last year
- Bam Read Index - Extract alignments from a bam file by readname☆28Updated last year
- Somatic (mosaic) SNV caller for 10X Genomics data using random forest classification and feature-based filters☆23Updated 6 years ago
- A quality control tool for FASTQ files written in rust☆52Updated 7 months ago
- A high-performance search engine for large-scale genomic interval datasets☆19Updated 4 years ago
- Genomic VCF to tab-separated values☆48Updated 2 years ago
- VEP-like tool for sequence ontology and HGVS annotation of VCF files☆24Updated this week