10XGenomics / rust-bwaLinks
Rust wrapper of the BWA C API
☆18Updated 5 months ago
Alternatives and similar repositories for rust-bwa
Users that are interested in rust-bwa are comparing it to the libraries listed below
Sorting:
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆33Updated 5 months ago
- Fast FASTQ sample demultiplexing in Rust.☆66Updated this week
- A better, faster way to count guides in CRISPR screens.☆33Updated 6 months ago
- bedtools-like functionality for interval sets in rust☆54Updated 3 months ago
- Bam Read Index - Extract alignments from a bam file by readname☆28Updated last year
- VEP-like tool for sequence ontology and HGVS annotation of VCF files☆23Updated this week
- gia: Genomic Interval Arithmetic☆64Updated last year
- Preprocessing paired-end reads produced with experiment-specific protocols☆32Updated 7 years ago
- A tool for projecting genomic alignments to transcriptomic coordinates☆36Updated last year
- Please consider using/contributing to https://github.com/nf-core/sarek☆41Updated 4 years ago
- Fast sequencing data quality metrics☆30Updated last month
- Numerical Encoding for Human Genetic Variants☆42Updated 2 years ago
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆44Updated 4 months ago
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆29Updated last year
- A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust☆31Updated 9 months ago
- (WIP) best-practices workflow for rare disease☆62Updated last year
- sfasta☆35Updated 6 months ago
- A bioinformatics tool written in Rust to find palindromic sequences in DNA☆35Updated 2 months ago
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆39Updated 2 years ago
- A quality control tool for FASTQ files written in rust☆52Updated 4 months ago
- The script presents a simple way to visualize features on human chromosome ideograms☆42Updated 6 months ago
- Genome-wide reconstruction of complex structural variants☆39Updated 3 years ago
- Somatic (mosaic) SNV caller for 10X Genomics data using random forest classification and feature-based filters☆23Updated 6 years ago
- Samwell: a python package for using genomic files... well☆20Updated 3 years ago
- drunk on perbase pileups and lua expressions☆19Updated 5 months ago
- seqcover allows users to view coverage for hundreds of genes and dozens of samples☆52Updated 4 years ago
- Single-Cell RNA-seq pseudo-aligner☆51Updated last year
- A FASTA/FASTQ format parser library☆20Updated last year
- Merging paired-end reads and removing adapters☆30Updated 5 years ago
- A C library for handling bigWig files☆81Updated 9 months ago