GMOD / tabix-jsLinks
Read Tabix-indexed files, either with .tbi or .csi indexes, in node or the browser
☆14Updated last month
Alternatives and similar repositories for tabix-js
Users that are interested in tabix-js are comparing it to the libraries listed below
Sorting:
- Read FASTA files indexed with .fai indexes. Also supports BGZIP+.gzi☆12Updated last month
- High performance WebGL genome visualization☆15Updated 4 years ago
- Visualize genomic data using webgl and webworkers, in an effort to provide a fluid, high-performance user experience.☆11Updated last year
- Interactive visual analytic tool for exploring epigenomics data w/ associated metadata, powered by HiGlass and Gosling☆13Updated 2 years ago
- A COVID-19 CoV Genetics (CG) browser to inform therapeutics development☆26Updated last month
- Single cell analysis in Javascript☆22Updated 2 months ago
- Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.☆39Updated 9 months ago
- WebGL-based viewer for spatially-resolved transcriptomics data☆28Updated 3 years ago
- Python bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer☆64Updated 2 months ago
- User-friendly Bioinformatics Tools☆18Updated 4 years ago
- Parse BAM and BAM index files in javascript for node and the browser☆24Updated 3 weeks ago
- HiGlass track for displaying arcs between disconnected regions☆10Updated 3 years ago
- requirements, examples, and tests for expression matrix file formats☆22Updated 7 years ago
- Read CRAM v3 and v2 in node or in the browser☆18Updated this week
- A tool for visualizing ABC enhancer-gene connections in the context of genetic variants.☆13Updated 2 years ago
- Retrieve data in genomic intervals with a Python interface for tabix.☆82Updated 8 years ago
- ☆26Updated 3 years ago
- a minimal, scriptable genome browser for python☆53Updated last year
- Tool for sharing, browsing and visualizing single-cell data stored in the Loom file format☆37Updated last year
- Python bindings to UCSC BigWig and BigBed library☆35Updated 2 weeks ago
- Data visualization and analysis framework focused on phenotype-molecular data integration at cohort level.☆48Updated last week
- Convert bioinformatics file formats to Zarr☆44Updated last week
- 3D Genome Browser☆32Updated 4 years ago
- The AnnSQL package enables SQL based queries on AnnData objects.☆40Updated 5 months ago
- Builds a docker container wrapping higlass-server and higlass-client in nginx☆31Updated 3 years ago
- A fast dataloader for bigwig files made for machine learning☆29Updated last month
- Methods for summarizing and visualizing multi-biosample functional genomic annotations☆47Updated 10 months ago
- EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…☆71Updated 2 years ago
- Oxbow makes genomic data ready for high-performance analytics.☆148Updated last week
- Server component for HiGlass that manages and serves tiled data☆20Updated 2 years ago