GMOD / tabix-js
Read Tabix-indexed files, either with .tbi or .csi indexes, in node or the browser
☆14Updated 2 weeks ago
Alternatives and similar repositories for tabix-js:
Users that are interested in tabix-js are comparing it to the libraries listed below
- Read FASTA files indexed with .fai indexes. Also supports BGZIP+.gzi☆12Updated 3 weeks ago
- High performance WebGL genome visualization☆15Updated 3 years ago
- Interactive visual analytic tool for exploring epigenomics data w/ associated metadata, powered by HiGlass and Gosling☆13Updated last year
- Parse BAM and BAM index files in javascript for node and the browser☆22Updated last week
- a minimal, scriptable genome browser for python☆49Updated 2 months ago
- Python NGS Repository☆9Updated 7 months ago
- WebGL-based viewer for spatially-resolved transcriptomics data☆26Updated 2 years ago
- Single cell analysis in Javascript☆21Updated 4 months ago
- ☆10Updated last month
- Website to analyze conflicting assertions in ClinVar☆18Updated last year
- A COVID-19 CoV Genetics (CG) browser to inform therapeutics development☆26Updated 3 months ago
- Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.☆39Updated 2 weeks ago
- Read specialized NGS formats as data frames in R, Python, and more.☆69Updated 3 months ago
- Python bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer☆55Updated this week
- User-friendly Bioinformatics Tools☆18Updated 4 years ago
- Builds a docker container wrapping higlass-server and higlass-client in nginx☆32Updated 2 years ago
- HiGlass track for displaying arcs between disconnected regions☆9Updated 2 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- viral-ngs: complete pipelines☆61Updated this week
- requirements, examples, and tests for expression matrix file formats☆22Updated 6 years ago
- Fast interval intersection library☆35Updated last week
- Rust wrapper of the BWA C API☆18Updated 3 years ago
- Data visualization and analysis framework focused on phenotype-molecular data integration at cohort level.☆26Updated this week
- A utility script to manage local docker instances of HiGlass☆24Updated last year
- Simple pure Python SAM parser and objects for working with SAM records☆64Updated 2 years ago
- Samwell: a python package for using genomic files... well☆20Updated 2 years ago
- Read CRAM v3 and v2 in node or in the browser☆18Updated 3 weeks ago
- WDL plugin for pytest☆48Updated last year
- Genomic Visualization Catalog☆13Updated 2 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆21Updated 2 years ago