uorf4u is a bioinformatics tool for conserved upstream ORF annotation.
☆15Sep 16, 2025Updated 11 months ago
Alternatives and similar repositories for uorf4u
Users that are interested in uorf4u are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- RiboPlotR package for Ribo-plot☆16Jun 12, 2025Updated last year
- Comparison pipeline for Prokaryote Protein Coding Gene Predictors☆28Feb 12, 2026Updated 6 months ago
- ☆15Sep 1, 2026Updated last week
- Generate Dose-Response Curves in Python☆12Updated this week
- Knowledge-based Identification of Pathway Enzymes (KIPEs) performs an automatic annotation of the flavonoid biosynthesis steps in a new t…☆17Jun 23, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A k-mer frequency statistics software☆15Nov 19, 2021Updated 4 years ago
- IsoVis enables fast and informative visualization of isoform structures and expression levels.☆17Aug 6, 2026Updated last month
- Apollo is an assembly polishing algorithm that attempts to correct the errors in an assembly. It can take multiple set of reads in a sing…☆28May 10, 2020Updated 6 years ago
- ☆18Jun 3, 2020Updated 6 years ago
- ☆11Feb 10, 2025Updated last year
- Generate Novel Insights from Gene Correlation Data☆14Jun 27, 2022Updated 4 years ago
- SINE annotation tool for plant genomes☆19Jan 21, 2024Updated 2 years ago
- ☆16Jul 7, 2025Updated last year
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆23Aug 12, 2026Updated 3 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- An alignment and analysis pipeline for Ribosome Profiling and RNA-seq data☆13Jul 2, 2024Updated 2 years ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆31Jan 26, 2022Updated 4 years ago
- End-guided RNA assembler☆15Dec 2, 2025Updated 9 months ago
- Code for LazyAF pipeline☆23Feb 12, 2024Updated 2 years ago
- Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models☆13Dec 20, 2022Updated 3 years ago
- HiC-Hiker: A probabilistic model to determine contig orientation in chromosome-length scaffolds with Hi-C☆26Jan 14, 2021Updated 5 years ago
- ☆94Jul 31, 2026Updated last month
- a multiple sequence alignment-trimming algorithm for accurate phylogenomic inference☆93Aug 18, 2026Updated 2 weeks ago
- Long disorder consensus predictor☆27Updated this week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Transcription Factor Enrichment Analysis☆37Apr 10, 2026Updated 4 months ago
- Code and software used to design de novo protein nanomachines. Supplementary material for "Computational design of nanoscale rotational m…☆10Mar 19, 2022Updated 4 years ago
- python implementation of the PAGE algorithm☆24Feb 15, 2026Updated 6 months ago
- Lightweight Python interfaces for reading, writing, and querying genomic regions (BED)☆16Jul 10, 2026Updated last month
- autoprot provides standardised, fast, and reliable proteomics data analysis while ensuring a high customisability needed to tailor the an…☆12Jul 22, 2026Updated last month
- ☆13Jun 17, 2023Updated 3 years ago
- Python tool to reduce size and redundancy of phylogenetic datasets☆56Dec 5, 2025Updated 9 months ago
- Pipeline to identify isoforms from full-length cDNA sequencing data☆27Oct 2, 2025Updated 11 months ago
- Clonal reconstruction from HTS data☆10Oct 27, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆12Feb 17, 2023Updated 3 years ago
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆14Jan 20, 2022Updated 4 years ago
- ☆33Jul 9, 2024Updated 2 years ago
- Code associated with with the 2023 Nature Genetics Paper "Region Capture Micro-C reveals coalescence of enhancers and promoters into nest…☆12May 31, 2023Updated 3 years ago
- PathIntegrate Python package for pathway-based multi-omics data integration☆19Nov 9, 2024Updated last year
- Analyse enhancer strength based on MPRA experiments.☆13Nov 12, 2020Updated 5 years ago
- ☆11Apr 21, 2023Updated 3 years ago