Alternatives and similar repositories for GORetriever

Users that are interested in GORetriever are comparing it to the libraries listed below

• BioComputingUP / MobiDB-lite
  Long disorder consensus predictor
  ☆17Updated last month
• idptools / sparrow
  Next generation sequence parameter library for proteins
  ☆35Updated last month
• BioColLab / PFresGO
  ☆21Updated last year
• mims-harvard / Phyla
  Phyla: Towards a Foundation Model for Phylogenetic Inference
  ☆22Updated 3 months ago
• konstin / knn-for-homology
  Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"
  ☆13Updated 2 years ago
• TattaBio / OMG
  ☆46Updated last year
• kaistsystemsbiology / DeepProZyme
  DeepECtransformer
  ☆28Updated 2 years ago
• ThomasCMcLean / LazyAF
  Code for LazyAF pipeline
  ☆21Updated last year
• walterlab-HMS / SPOC
  Code repository for the SPOC tool for scoring binary AF-M predicitons.
  ☆13Updated 5 months ago
• microsoft / protnote
  ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…
  ☆55Updated 5 months ago
• Llannelongue / B4PPI
  Benchmarking Pipeline for Prediction of Protein-Protein Interactions
  ☆13Updated 3 years ago
• PombertLab / 3DFI
  The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.
  ☆20Updated last year
• whatdoidohaha / RFA
  Reference-free analysis of genetic architecture
  ☆18Updated last year
• Sanofi-Public / RiboNN
  RiboNN: predicting translation efficiencies from mRNA sequences
  ☆39Updated 2 weeks ago
• psipred / merizo_search
  Fast protein domain structure embedding+search tool
  ☆26Updated 3 weeks ago
• steineggerlab / colabfold-protocol
  ColabFold protocol
  ☆54Updated last year
• KULL-Centre / _2022_functional-sites-cagiada
  ☆23Updated 2 years ago
• graph-part / graph-part
  GraphPart, a data partitioning method for ML on biological sequences
  ☆30Updated last year
• teevee112 / DeepLoc-2.0
  Multi-label subcellular localization and sorting signal prediction based on protein foundation models
  ☆20Updated last year
• gzBiomedical / EpiScan
  Antibody-Specific Epitope Mapping
  ☆14Updated last month
• Bitbol-Lab / Phylogeny-MSA-Transformer
  Supporting repository for "Protein language models trained on multiple sequence alignments learn phylogenetic relationships" (https://www…
  ☆17Updated 9 months ago
• Rostlab / goPredSim
  ☆48Updated 10 months ago
• samsledje / philharmonic
  Decoding the functional networks of non-model organisms
  ☆11Updated 2 months ago
• cbcrg / msa-af2-nf
  Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models
  ☆12Updated 2 years ago
• UCLOrengoGroup / cath-alphaflow
  ☆23Updated this week
• maslov-group / DR-BERT
  ☆25Updated 2 years ago
• jurgjn / af-protein-universe
  Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…
  ☆27Updated 2 years ago
• jnoms / vpSAT
  Virus Protein Structural Analysis Toolkit
  ☆12Updated last year
• broadinstitute / g2papi
  Python Client Library for the G2P Portal API
  ☆13Updated 2 months ago
• yanzhanglab / Graph2GO
  Graph-based representation learning method for protein function prediction
  ☆24Updated last month