Junction centric alternative splicing translator
☆22May 22, 2026Updated last month
Alternatives and similar repositories for jcast
Users that are interested in jcast are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A computational workflow for exitron splicing identification☆16Updated this week
- Exploring Isoform-specific interactions☆13Sep 16, 2025Updated 9 months ago
- ☆17Jul 19, 2024Updated last year
- Mapping Alternative Splicing Events to pRoteins☆21Feb 8, 2022Updated 4 years ago
- Expedition suite for computing, visualizing, and analyzing single-cell alternative splicing data☆11Jun 29, 2017Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Confidence Estimation for Mass Spectrometry Proteomics☆14Jun 21, 2026Updated 2 weeks ago
- ☆12Feb 19, 2021Updated 5 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆29Feb 12, 2021Updated 5 years ago
- A Shiny-based framework to analyze and visualize interactively genomic data☆11May 11, 2023Updated 3 years ago
- ☆17Feb 16, 2024Updated 2 years ago
- ☆15Apr 26, 2022Updated 4 years ago
- IsoVis enables fast and informative visualization of isoform structures and expression levels.☆15Jun 19, 2026Updated 2 weeks ago
- ☆14Aug 31, 2016Updated 9 years ago
- ☆11Oct 7, 2025Updated 8 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Just the leafviz parts of Leafcutter☆16Apr 2, 2026Updated 3 months ago
- Clonal structure identification through penalizing pairwise differences☆11May 14, 2026Updated last month
- ☆161Mar 16, 2026Updated 3 months ago
- ☆13Aug 14, 2020Updated 5 years ago
- ExTraMapper is a tool to find Exon and Transcript-level Mappings of a given pair of orthologous genes between two organisms using sequenc…☆11Apr 20, 2022Updated 4 years ago
- Map genetic variants and protein positions to protein interfaces in 3D☆13Sep 22, 2023Updated 2 years ago
- Accelerate the generation of personalized proteomes from a Variant calling format (VCF) file and a reference proteome using graphical pro…☆21Apr 28, 2023Updated 3 years ago
- NetICS: network-based integration of multi-omics data for prioritizing cancer genes☆16Jun 27, 2021Updated 5 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Jan 18, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Peptide Correlation analysis☆11Oct 3, 2024Updated last year
- Automatic RNA-Seq Pipelines with Interactive Report☆25Jun 1, 2025Updated last year
- Command-line tool for the visualization of splicing events across multiple samples☆143Jun 28, 2024Updated 2 years ago
- Comprehensive and scalable differential splicing analyses☆18Dec 19, 2025Updated 6 months ago
- A pipeline for identifying indel derived neoantigens using RNA-Seq data☆30Aug 29, 2022Updated 3 years ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆95Apr 29, 2026Updated 2 months ago
- nRex: Germline and somatic single-nucleotide, short indel and structural variant calling☆12Sep 19, 2025Updated 9 months ago
- ☆16Apr 10, 2024Updated 2 years ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆22Jun 22, 2026Updated last week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Analysis platform for large-scale dose-dependent data☆29Nov 25, 2025Updated 7 months ago
- ☆11May 12, 2026Updated last month
- A network-based approach for exon set enrichment☆15Jul 16, 2025Updated 11 months ago
- Nextflow pipeline for Mutect2 somatic variant calling best practices☆23Jun 14, 2024Updated 2 years ago
- uorf4u is a bioinformatics tool for conserved upstream ORF annotation.☆15Sep 16, 2025Updated 9 months ago
- ActiveDriverDB☆12May 1, 2023Updated 3 years ago
- University of Cambridge PhD thesis☆17Jan 8, 2021Updated 5 years ago