ThomasCMcLean / LazyAFLinks
Code for LazyAF pipeline
☆20Updated last year
Alternatives and similar repositories for LazyAF
Users that are interested in LazyAF are comparing it to the libraries listed below
Sorting:
- Fast protein domain structure embedding+search tool☆25Updated 2 weeks ago
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆31Updated 2 years ago
- Evolutionary conservation estimation of residues or nucleotides☆47Updated 3 years ago
- ☆22Updated 2 years ago
- DeepECtransformer☆28Updated last year
- Rendering protein mutation movies from predicted 3D structures☆20Updated last year
- Virus Protein Structural Analysis Toolkit☆12Updated last year
- ☆30Updated last year
- GraphPart, a data partitioning method for ML on biological sequences☆30Updated last year
- a collection of colabs useful for molecular biology☆31Updated last year
- Python framework for doing ancestral sequence reconstruction☆41Updated last year
- A package for making tree-based visualizations for embedding vectors☆10Updated 2 years ago
- Cross-protein transfer learning for variant effect prediction☆20Updated 2 years ago
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Updated last year
- ☆44Updated last year
- Long disorder consensus predictor☆17Updated last month
- A fast, alignment-free method for estimating sequence conservation using protein sequence embedding☆17Updated 2 years ago
- ☆70Updated 11 months ago
- ColabFold protocol☆53Updated 11 months ago
- Scripts for "Determining protein structures using deep mutagenesis", Schmiedel & Lehner, Nature Genetics, 2019☆17Updated 6 years ago
- ☆23Updated 4 months ago
- Fully convolutional deep learning variant effect predictor architecture☆23Updated last year
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆55Updated 5 months ago
- Python package and command line tool for epitope prediction☆52Updated last year
- Automatic oligonucleotide design for PCR-based gene synthesis☆47Updated 6 years ago
- Next generation sequence parameter library for proteins☆35Updated 3 weeks ago
- The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.☆20Updated last year
- Python code to color a PDB structure based on parameters from a multiple sequence alignment☆32Updated 2 years ago
- ☆43Updated last year
- ☆43Updated last week