BioComputingUP / ring-pymol
This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua
☆26Updated 3 months ago
Alternatives and similar repositories for ring-pymol:
Users that are interested in ring-pymol are comparing it to the libraries listed below
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆25Updated last week
- Binding pocket optimization based on force fields and docking scoring functions☆31Updated last month
- scripts to find PBD structures for cancer driver proteins☆31Updated 2 months ago
- Code for ApoDock☆20Updated 3 weeks ago
- Scores for Hydrophobicity and Charges based on SASAs☆31Updated last month
- ☆27Updated last month
- Fully automated high-throughput MD pipeline☆60Updated this week
- ☆31Updated last year
- Modelling protein conformational landscape with Alphafold☆47Updated 2 weeks ago
- Automated construction of protein chimeras and their analysis.☆14Updated last year
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated 11 months ago
- Modelling of Large Protein Complexes☆37Updated last year
- Clustering of SES virtual probes for pocket generation and ranking via Isolation Forest☆12Updated 2 years ago
- Quick mapping of Uniprot sequences to PDB structures☆31Updated last month
- Extension of ThermoMPNN for double mutant predictions☆32Updated last month
- Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file☆32Updated last year
- ☆16Updated 3 weeks ago
- Pras Server is a library to repair PDB or mmCIF structures, add missing heavy atoms and hydrogen atoms and assign secondary structure by …☆27Updated 10 months ago
- ☆37Updated 5 months ago
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- Kuhlman Lab Installation of AlphaFold3☆25Updated last month
- Some Rosetta Scripts that allow for various simple tasks☆14Updated 5 years ago
- PyDock Tutorial☆31Updated 6 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆27Updated last year
- Cyclic-peptide - protein complexes benchmark and associated scripts and data☆11Updated 8 months ago
- ☆26Updated 9 months ago
- dockECR: open consensus docking and ranking protocol for virtual screening of small molecules☆25Updated 3 years ago
- Analysis of alphafold and colabfold results☆27Updated 3 weeks ago
- KIF - Key Interactions Finder. A python package to identify the key molecular interactions that regulate any conformational change.☆29Updated 11 months ago
- Improving Structure-Based Virtual Screening with Ensemble Docking and Machine Learning☆23Updated 3 years ago