Alternatives and similar repositories for 1kp

Users that are interested in 1kp are comparing it to the libraries listed below

• mrmckain / Fast-Plast
  Automated de novo assembly of whole chloroplast genomes.
  ☆47Updated last year
• jingwanglab / Populus_genomic_prediction_climate_vulnerability
  ☆40Updated 2 years ago
• BioEasy / EasyCodeML
  EasyCodeML: A visual tool for analysis of selection using CodeML
  ☆82Updated 2 years ago
• ForBioPhylogenomics / tutorials
  Tutorials on phylogenomic analyses for the ForBio Phylogenomics course
  ☆37Updated last year
• tonig-evo / workshop-popgenome
  Tutorial about R package PopGenome
  ☆43Updated 6 years ago
• xtmtd / PLWS
  Phylogenomics from Low-coverage Whole-genome Sequencing
  ☆39Updated 5 years ago
• evolgeniusteam / EvolviewDocumentation
  Documentation for Evolview
  ☆29Updated 3 years ago
• mossmatters / phyloscripts
  Helper scripts for processing and visualization of phylogenetics datasets
  ☆30Updated last year
• GoreLab / Sorghum-HapMap
  Hapmap-v1
  ☆12Updated 5 years ago
• mennodejong1986 / SambaR
  SambaR: Snp datA Management and Basic Analyses in R
  ☆30Updated last month
• nylander / catfasta2phyml
  Concatenates FASTA formatted files to one "phyml" (PHYLIP) formatted file
  ☆73Updated last year
• rapidspeciation / biodiversity_genomics_course
  biodiversity genomics course by Nicol Rueda, Karin Näsvall and Joana Meier from the Wellcome Sanger Institute
  ☆57Updated 4 months ago
• petrelharp / local_pca
  Methods for examining PCA locally along the genome.
  ☆83Updated last year
• nt246 / physalia-lcwgs
  Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022
  ☆63Updated 11 months ago
• genomeannotation / GAG
  Generates an NCBI .tbl file of annotations on a genome.
  ☆68Updated 7 years ago
• fethalen / Patchwork
  Alignment-based retrieval and concatenation of phylogenetic markers from whole genome sequence (WGS) data
  ☆36Updated last year
• esayyari / DiscoVista
  ☆42Updated 2 years ago
• mfoll / BayeScan
  Detecting natural selection from population-based genetic data
  ☆27Updated 6 years ago
• hewm2008 / VCF2Dis
  VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files
  ☆48Updated last month
• Sun-Yanbo / FasParser
  A Windows Graphical Platform for Batch Manipulation of Tremendous Amount of Sequence Data
  ☆30Updated 4 years ago
• ddarriba / jmodeltest2
  Automatically exported from code.google.com/p/jmodeltest2
  ☆81Updated 4 years ago
• JinfengChen / Scripts
  ☆74Updated 5 years ago
• speciationgenomics / presentations
  Presentations from the course
  ☆38Updated 2 years ago
• steuernb / NLR-Annotator
  NLR-Annotator upload
  ☆72Updated 2 years ago
• edgardomortiz / sam2consensus
  Get the consensus sequences from SAM (and BAM) files, ignoring the reference
  ☆12Updated 5 years ago
• LKremer / CAFE_fig
  A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)
  ☆63Updated 6 years ago
• arzwa / wgd
  Python package and CLI for whole-genome duplication related analyses. **This package is deprecated in favor of** https://github.com/heche…
  ☆86Updated last year
• AntonelliLab / seqcap_processor
  Bioinformatic pipeline for processing Sequence Capture data for Phylogenetics
  ☆22Updated 2 years ago
• BenoitMorel / ParGenes
  A massively parallel tool for model selection and tree inference on thousands of genes
  ☆50Updated last year
• MikkelSchubert / paleomix
  Pipelines and tools for the processing of ancient and modern HTS data.
  ☆47Updated last month