smirarab / 1kp
Data and scripts used in the oneKP capstone analyses
☆13Updated 3 years ago
Alternatives and similar repositories for 1kp:
Users that are interested in 1kp are comparing it to the libraries listed below
- Tutorial about R package PopGenome☆41Updated 6 years ago
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆34Updated last year
- Automated de novo assembly of whole chloroplast genomes.☆45Updated 6 months ago
- SambaR: Snp datA Management and Basic Analyses in R☆28Updated last week
- ☆39Updated last year
- Materials for genome annotation sessions at the WORKSHOP ON GENOMICS, CESKY KRUMLOV☆14Updated 3 months ago
- Repository for speciation genomics website☆25Updated 9 months ago
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆45Updated 5 years ago
- ☆16Updated 4 years ago
- ☆18Updated 2 years ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆34Updated last year
- Detecting natural selection from population-based genetic data☆27Updated 6 years ago
- Tutorials on evolutionary genomics☆42Updated 3 years ago
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆33Updated 2 months ago
- MitoDNA extending assembler from NGS data☆21Updated last year
- Phylogenomics from Low-coverage Whole-genome Sequencing☆38Updated 4 years ago
- Generates an NCBI .tbl file of annotations on a genome.☆66Updated 7 years ago
- A shiny application to visualize MCscan result☆36Updated 2 years ago
- ☆18Updated 4 years ago
- Alignment-based retrieval and concatenation of phylogenetic markers from whole genome sequence (WGS) data☆36Updated 11 months ago
- ☆21Updated 5 years ago
- Likelihood-based Selective Sweep Detection☆37Updated last year
- A massively parallel tool for model selection and tree inference on thousands of genes☆47Updated last year
- Scripts and resources for the haploblocks manuscript☆15Updated 5 years ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 2 years ago
- ☆39Updated 2 years ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆34Updated last year
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆58Updated 5 months ago
- biodiversity genomics course by Nicol Rueda, Karin Näsvall and Joana Meier from the Wellcome Sanger Institute☆49Updated 2 months ago
- ☆9Updated 9 years ago