husonlab / phylosketch2Links
Sketch phylogenetic trees and networks
☆24Updated this week
Alternatives and similar repositories for phylosketch2
Users that are interested in phylosketch2 are comparing it to the libraries listed below
Sorting:
- Better Alignments with Translated HMMER☆24Updated this week
- Parallel/Homoplasic SNP Finder☆21Updated 2 years ago
- Genome size estimation from long read overlaps☆80Updated last month
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated 8 months ago
- ☆30Updated last year
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆36Updated last week
- ☆18Updated last year
- Non-redundant pangenome assemblies from multiple genomes or bins☆14Updated 8 months ago
- Extracts subgraphs or components from a graph in GFA format☆24Updated last year
- Scaffolding with assembly likelihood optimization☆21Updated 5 years ago
- Simple-to-use interactive comparison of two bacterial genomes☆19Updated last month
- ☆20Updated 2 years ago
- Improved Phased Assembler☆28Updated 3 years ago
- software to identify primers that can distinguish genomes☆20Updated 3 weeks ago
- Rapid discovery of reciprocal best blast pairs.☆10Updated last year
- Indels are not ideal - quick test for interrupted ORFs in bacterial/microbial genomes☆15Updated 7 years ago
- Dividing heterogeneous long-read sequencing into groups with de Bruijn graphs☆39Updated 3 months ago
- transposable element typing pipeline☆19Updated last year
- Differential k-mer analysis☆39Updated last year
- A tool for recovering synteny blocks from multiple alignment☆32Updated 4 years ago
- A comparative genome scaffolding tool☆16Updated 7 years ago
- Basecalling configuration prediction through FASTQ files☆32Updated last month
- PoSeiDon: positive selection detection and recombination analysis pipeline☆39Updated 3 months ago
- Hapo-G is a tool that aims to improve the quality of genome assemblies by polishing the consensus with accurate reads.☆26Updated 2 months ago
- Plot genome alignment figure using progressiveMauve & genoPlotR☆22Updated 3 years ago
- Pangenome Sequence Naming: a backwards-compatible hack to simplify the identification of samples and haplotypes in pangenomes☆44Updated last year
- ZGA prokaryotic genome assembly and annotation pipeline☆13Updated last year
- Manipulate and generate figures for trees in Newick format☆22Updated 5 months ago
- ☆45Updated last month
- Read contamination removal☆25Updated last year