Sketch phylogenetic trees and networks
☆26Jul 24, 2026Updated this week
Alternatives and similar repositories for phylosketch2
Users that are interested in phylosketch2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 2 years ago
- Expedite large-scale identification of CNVs within predefined genomic regions. Online app available for those with GP2 Tier 2 Access.☆14Mar 16, 2026Updated 4 months ago
- PG-SCUnK mesure quality of Pan-Genome Graphs using Single Copy and Universal k-mers☆24Feb 16, 2026Updated 5 months ago
- ☆17Jun 22, 2026Updated last month
- Phylogenetic model exploration with deep learning☆12Jun 15, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Interactive phylogenetic tree viewer/editor☆49Jul 12, 2023Updated 3 years ago
- De novo chromosome-level scaffolding and phasing tool using Hi-C☆30Nov 23, 2025Updated 8 months ago
- A birth-death-hybridization based phylogenetic network simulator.☆11Oct 2, 2024Updated last year
- app to collapse Pango lineages for reporting☆13Dec 9, 2025Updated 7 months ago
- Homologizer: phasing gene copies into polyploid subgenomes☆13Feb 3, 2026Updated 5 months ago
- Biological Sequence Substitution Models for Julia☆17Apr 23, 2023Updated 3 years ago
- Phylogenetic ANalyses of DiversificAtion (in Julia)☆12Jul 13, 2024Updated 2 years ago
- A genome-scale, fast, and precise segmental duplications mapping tool☆36Sep 11, 2024Updated last year
- blastn2dotplots: multiple dot-plot visualizer☆28Sep 15, 2025Updated 10 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- que paquete☆10Jul 17, 2024Updated 2 years ago
- phylogenetics tools for linux (and other mostly posix compliant) computers☆127Apr 18, 2026Updated 3 months ago
- tree visualization for tree + annotation data☆62Jun 17, 2025Updated last year
- Annotate Olfactory receptor CDS from genome☆11Apr 29, 2023Updated 3 years ago
- Genome-wide scan for balancing selection using beta statistic☆32Apr 26, 2023Updated 3 years ago
- convert alignment bam to pairwise alignment or multiple sequence alignment (msa) at genome specific region☆13May 21, 2024Updated 2 years ago
- Simulation package for getting gene tree distributions and loci / SNPs from input tree topologies and migration / Ne scenarios. Wraps aro…☆14Apr 20, 2024Updated 2 years ago
- ☆162Apr 13, 2026Updated 3 months ago
- Inferring natural selection by comparative population genomic analysis across species☆27Oct 31, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Phyling: phylogenetic inference from annotated genomes☆33Updated this week
- Genome Assembly 102☆18Apr 23, 2025Updated last year
- Bash scripts for analysis of Hyb-Seq data (from raw reads to species trees/networks)☆20Jun 10, 2026Updated last month
- Generate alternative long reads with the help of target`s assemblies, target`s PacBio HiFi reads and reference genome.☆20Mar 25, 2026Updated 4 months ago
- ☆44Dec 29, 2025Updated 6 months ago
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆60Jul 5, 2026Updated 2 weeks ago
- HELIANO is a software for detection and classification of Helitron-like elements.☆34Jul 13, 2026Updated last week
- ☆32Jun 18, 2026Updated last month
- An R function to compute Concordance Factors from SNP datasets☆16Dec 4, 2025Updated 7 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Genome size estimation from long read overlaps☆92Jun 22, 2026Updated last month
- Pairwise whole genome aligner☆243Jul 16, 2026Updated last week
- Scatterbar - data visualization for proportional data across many spatially resolved coordinates☆12Mar 3, 2025Updated last year
- Pangenome graphs visualisation, distance computing, reconstruction of sequences and other utility functions☆38Apr 28, 2026Updated 2 months ago
- Whole Genome Alignment Tools☆225Nov 6, 2025Updated 8 months ago
- String algorithm visualizations☆14Feb 7, 2023Updated 3 years ago
- Random scripts, mostly for dealing with RADseq data and DNA sequence alignments☆18Oct 2, 2025Updated 9 months ago