EdinburghGenomics / well_duplicatesLinks
localised duplicate detection on patterned flow cells
☆10Updated 6 years ago
Alternatives and similar repositories for well_duplicates
Users that are interested in well_duplicates are comparing it to the libraries listed below
Sorting:
- Mapping-free variant caller for short-read Illumina data☆20Updated 5 years ago
- blast, shmlast☆21Updated 5 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year
- ☆18Updated 8 years ago
- reference free variant assembly☆34Updated 2 years ago
- Stupid Simple Structural Variant View☆25Updated 9 years ago
- "The who the what the huh?" is our pipeline for converting bcl files to fastq and performing QC.☆11Updated 3 years ago
- HGVS variant description extractor☆11Updated 5 years ago
- Scripts for creating a Kraken database from the Comprehensive Antibiotic Resistance Database☆10Updated 9 years ago
- ☆28Updated 8 years ago
- Python scripts for Exploratory Data Analysis of Pacific Biosciences sequence data☆18Updated 11 years ago
- edit distance sequence tags and helpers☆12Updated 4 years ago
- full taxonomer cython repository☆22Updated 6 years ago
- Rapid competitive read demulitplexer. Made with tries.☆23Updated 8 months ago
- A simple tool to fix PacBio fasta/q that was not properly split into subreads☆16Updated 4 years ago
- Automated optimisation of de-novo transcriptome assembly☆25Updated 10 years ago
- Indel-aware consensus for aligned BAM☆21Updated 5 months ago
- A dotplot application for DNA/RNA sequence☆11Updated 3 years ago
- Pipeline for poreathon☆14Updated 11 years ago
- Process Illumina instrument data into SAM/BAM/CRAM files.☆10Updated 3 weeks ago
- What's The Function of these genes?☆22Updated 8 years ago
- Unfazed by genomic variant phasing☆27Updated last year
- Genomic Assemblies Merger for NGS☆26Updated 2 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 6 years ago
- Integrated Variant Caller☆17Updated 7 years ago
- Somatic (mosaic) SNV caller for 10X Genomics data using random forest classification and feature-based filters☆23Updated 6 years ago
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆40Updated 2 years ago
- Docker images of bioinformatics software☆21Updated 8 years ago
- Please see https://github.com/chanzuckerberg/czid-workflows for the latest version of CZ ID workflows.☆27Updated 4 years ago
- A set of scripts to help automate the construction of data sets for multi-gene phylogenetic analyses.☆13Updated 6 years ago