pmelsted / BFCounterLinks
☆24Updated 8 years ago
Alternatives and similar repositories for BFCounter
Users that are interested in BFCounter are comparing it to the libraries listed below
Sorting:
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆58Updated 2 months ago
- An illumina paired-end and mate-pair short read simulator. This project attempts to model as many of the quirks that exist in Illumina da…☆67Updated 11 years ago
- Exploration of controlled loss of quality values for compressing CRAM files☆36Updated 2 years ago
- 10x Genomics Reads Simulator☆46Updated last year
- Scripts for implementing read until and other examples.☆31Updated 5 years ago
- Error correction and variant calling algorithm for nanopore sequencing☆26Updated 9 years ago
- de Bruijn Graph-based read aligner☆34Updated 7 years ago
- Graphite - Graph-based variant adjudication☆28Updated 4 years ago
- adds sample names and read-group (RG) tags to BAM alignments☆51Updated 4 years ago
- simple library for dealing with SAM cigar strings☆41Updated 4 years ago
- Estimating k-mer coverage histogram of genomics data☆76Updated last year
- Exact Tandem Repeat Finder (not a TRF replacement)☆50Updated 6 years ago
- efficient alignment of strings to partially ordered string graphs☆33Updated 3 years ago
- The Modular Aligner and The Modular SV Caller☆46Updated 2 years ago
- Preprocessing paired-end reads produced with experiment-specific protocols☆32Updated 7 years ago
- REINDEER REad Index for abuNDancE quERy☆56Updated 4 months ago
- FermiKit small variant calls for public SGDP samples☆17Updated 9 years ago
- Fast calculations of linkage-disequilibrium in large-scale human cohorts☆44Updated 6 years ago
- Developments in next generation sequencing: instruments, read lengths, throughput. See☆27Updated 7 years ago
- Analysis tool for Nanopore sequencing data☆34Updated 6 years ago
- Tools to process LIANTI sequence data☆23Updated 6 years ago
- program for haplotype phasing from sequence reads and related tools☆25Updated 7 years ago
- Population-scale detection of novel sequence insertions☆27Updated 3 years ago
- my PhD thesis☆36Updated 6 years ago
- A method to identify structural variation from sequencing data in target regions☆32Updated 5 years ago
- A efficient method to construct BWT index of a given DNA sequence, especially useful for gigantic and high similar genome.☆14Updated 9 years ago
- High-performance error correction for Illumina resequencing data☆73Updated 9 years ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆58Updated 3 years ago
- The CHM1-NA12878 benchmark for single-sample SNP/INDEL calling from WGS Illumina data☆31Updated 7 years ago
- RUFUS k-mer based genomic variant detection☆54Updated last week