nathanhaigh / 2019_EMBL-ABR_Snakemake_webinarLinks
Scripts and Snakemake pipeline used in the EMBL-ABR webinar
☆13Updated 6 years ago
Alternatives and similar repositories for 2019_EMBL-ABR_Snakemake_webinar
Users that are interested in 2019_EMBL-ABR_Snakemake_webinar are comparing it to the libraries listed below
Sorting:
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- A small R package to make sequencing read coverage plots in R.☆40Updated last month
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- Glimma R package☆50Updated last year
- Representation and manipulation of genomic intervals☆46Updated this week
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆35Updated 7 years ago
- Transcript quantification import with automatic metadata detection☆67Updated this week
- fastqcr: Quality Control of Sequencing Data☆75Updated 2 years ago
- ☆22Updated last month
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 4 years ago
- Lollipop-diagram to interactively visualize genetic mutations☆33Updated last year
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- An htmlwidget version of igv, for RStudio and Shiny apps☆38Updated 3 months ago
- Htmlwidgets binding R commands to the BioCircos.js library☆39Updated 6 years ago
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆21Updated 8 years ago
- R interface to the JBrowse 2 Linear Genome View.☆39Updated last year
- An interactive web-tool for RNA-seq analysis☆70Updated 9 months ago
- interactive plots for differential expression analysis☆34Updated 5 months ago
- Bioconductor package that makes BIG data pint-sized.☆21Updated last year
- Genomic plot in trellis layout☆41Updated last year
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated last year
- R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data☆21Updated 6 months ago
- ☆29Updated last year
- A pipeline for differential expression and differential alternative splicing analysis☆67Updated last year
- 𝐠𝐠𝐯𝐨𝐥𝐜 effortlessly translates differential expression datasets and RNAseq data into informative volcano plots. Highlight genes of …☆65Updated 3 months ago
- A tidy interface for coverage analysis☆31Updated 5 years ago
- Talk to the NCBI EUtils☆22Updated 5 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last month
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆28Updated 3 years ago