nathanhaigh / 2019_EMBL-ABR_Snakemake_webinarLinks
Scripts and Snakemake pipeline used in the EMBL-ABR webinar
☆13Updated 6 years ago
Alternatives and similar repositories for 2019_EMBL-ABR_Snakemake_webinar
Users that are interested in 2019_EMBL-ABR_Snakemake_webinar are comparing it to the libraries listed below
Sorting:
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- Htmlwidgets binding R commands to the BioCircos.js library☆39Updated 6 years ago
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 4 years ago
- ☆23Updated last week
- Glimma R package☆50Updated last year
- R interface to the JBrowse 2 Linear Genome View.☆39Updated last year
- A small R package to make sequencing read coverage plots in R.☆40Updated 2 weeks ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- Transcript quantification import with automatic metadata detection☆67Updated last week
- Representation and manipulation of genomic intervals☆46Updated last month
- Bioconductor package that makes BIG data pint-sized.☆21Updated last year
- An htmlwidget version of igv, for RStudio and Shiny apps☆38Updated 4 months ago
- ☆28Updated last year
- Tools for visualizing genomics data☆69Updated 4 years ago
- ☆16Updated 8 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆27Updated 3 months ago
- R package for genomic feature analysis and visualization☆79Updated 9 months ago
- A pipeline for differential expression and differential alternative splicing analysis☆66Updated last year
- mulea - an R package for enrichment analysis using various ontologies and empirical false discovery rate☆28Updated 6 months ago
- fastqcr: Quality Control of Sequencing Data☆76Updated 2 years ago
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 7 years ago
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆35Updated 7 years ago
- R package wrapping bedtools☆44Updated 10 months ago
- Read HOMER motif analysis output in R.☆17Updated 7 years ago
- An interactive web-tool for RNA-seq analysis☆70Updated last month
- ☆36Updated last month
- Genomic plot in trellis layout☆42Updated last year
- ☆29Updated 6 years ago
- An efficient way to guess the library type of your RNA-Seq data.☆33Updated 3 years ago