raphael-group / NAIBRLinks
Novel Adjacency Identification with Barcoded Reads
☆13Updated 3 years ago
Alternatives and similar repositories for NAIBR
Users that are interested in NAIBR are comparing it to the libraries listed below
Sorting:
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆25Updated 9 years ago
- Stupid Simple Structural Variant View☆25Updated 9 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 2 months ago
- A wrapper for calling small variants from human germline high-coverage single-sample Illumina data☆14Updated 6 years ago
- Hemang Parikh☆11Updated 10 years ago
- PopSTR - A Population based microsatellite genotyper☆32Updated 2 years ago
- An ultra fast and accurate paired-end adapter trimmer that needs no a priori adapter sequences.☆22Updated 5 years ago
- laSV is a software package that employs local assembly to detect structural variations from whole-genome high-throughput sequencing datas…☆12Updated 9 years ago
- Wrapper for RTG's vcfeval; DEPRECATED!☆21Updated 9 years ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated 2 years ago
- Assemble the Genome in a Bottle sequencing data☆10Updated 8 years ago
- Recommended Graphtyper pipelines☆15Updated 4 years ago
- Prioritize structural variants based on CADD scores☆29Updated 5 years ago
- ☆13Updated 8 years ago
- reference free variant assembly☆34Updated 2 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆18Updated 6 years ago
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 6 years ago
- Copy number estimation of highly duplicated sequences☆10Updated 8 years ago
- robust matching of small variant datasets using flexible scoring schemes☆11Updated 5 years ago
- A method to identify structural variation from sequencing data in target regions☆32Updated 5 years ago
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆18Updated 5 years ago
- sort genomic data