openvax / gene-listsLinks
Gene lists related to cancer immunotherapy
☆14Updated last year
Alternatives and similar repositories for gene-lists
Users that are interested in gene-lists are comparing it to the libraries listed below
Sorting:
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 4 years ago
- ☆11Updated 7 years ago
- ☆29Updated 4 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated last week
- The Genome U-Plot is a JavaScript tool to visualize chromosomal abnormalities in the Human Genome using a U-shape layout.☆32Updated 2 years ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 8 months ago
- extract SV signal from a BAM☆11Updated 7 years ago
- v2.x of the microassembly based somatic variant caller☆23Updated 4 months ago
- highly-efficient & lightweight mutation signature matrix aggregation☆19Updated 3 years ago
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Updated 3 years ago
- ☆22Updated 2 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated last year
- A tool for Read Multi-Mapper Resolution☆24Updated 8 years ago
- Building the constrained coding regions (CCR) model☆16Updated 6 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆18Updated 6 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Updated 7 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 6 years ago
- iAnnotateSV is a Python library and command-line software toolkit to annotate and visualize structural variants detected from Next Genera…☆16Updated 2 months ago
- 📊Evaluating, filtering, comparing, and visualising VCF☆28Updated 2 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated 6 months ago
- picking up low allelic-fraction, somatic variants from tumor samples☆14Updated 7 years ago
- Haplotype-based somatic genome simulator☆10Updated 8 years ago
- Genomic VCF to tab-separated values☆47Updated 2 years ago
- seqcover allows users to view coverage for hundreds of genes and dozens of samples☆52Updated 4 years ago
- DRAGEN Tumor/Normal workflow post-processing☆23Updated 2 years ago
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago