Alternatives and similar repositories for tes-azure-legacy

Users that are interested in tes-azure-legacy are comparing it to the libraries listed below

• microsoft / CromwellOnAzure
  Microsoft Genomics implementation of the Broad Institute's Cromwell workflow engine on Azure
  ☆138Updated 6 months ago
• microsoft / genomicsnotebook
  Jupyter Notebooks on Azure for Genomics Data Analysis
  ☆109Updated 6 months ago
• statgenetics / seqspark
  SEQSpark documentation
  ☆18Updated 5 years ago
• stjudecloud / workflows
  Bioinformatics workflows developed for and used on the St. Jude Cloud project.
  ☆38Updated this week
• adamstruck / cwl2wdl
  Convert CWL to WDL
  ☆17Updated 9 years ago
• ga4gh / task-execution-schemas
  ☆92Updated last month
• common-workflow-lab / wdl2cwl
  [Experimental] Workflow Definition Language (WDL) to CWL
  ☆28Updated 4 years ago
• dnanexus / dxWDL
  Workflow Description Language compiler for the DNAnexus platform
  ☆42Updated 2 years ago
• microsoft / nextflow-runner
  ☆15Updated 2 years ago
• ga4gh / tool-registry-service-schemas
  APIs for discovering genomics tools, their metadata and their containers
  ☆32Updated 2 months ago
• stjudecloud / wdldoc
  Create WDL documentation using Markdown.
  ☆28Updated this week
• chanzuckerberg / idseq-workflows
  Portable WDL workflows for IDseq production pipelines
  ☆32Updated 3 years ago
• broadinstitute / fiss
  FireCloud Service Selector (FISS) -- Python bindings and CLI for FireCloud execution engine
  ☆31Updated 8 months ago
• 4dn-dcic / tibanna
  Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…
  ☆71Updated last month
• ga4gh / wiki
  a place for GA4GH-related wiki pages
  ☆16Updated 8 years ago
• elixir-cloud-aai / TESK
  GA4GH Task Execution Service Root Project + Deployment scripts on Kubernetes
  ☆43Updated 10 months ago
• seqeralabs / tower-cli
  Nextflow Tower CLI tool
  ☆50Updated this week
• PMCC-BioinformaticsCore / janis
  [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
  ☆44Updated 2 years ago
• iobio / bam.iobio.io
  http://bam.iobio.io
  ☆47Updated last year
• jamesware / alleleFrequencyApp
  Allele frequency filter app
  ☆14Updated 3 years ago
• Molmed / checkQC
  CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria
  ☆29Updated 3 weeks ago
• broadinstitute / seqr-loading-pipelines
  hail-based pipelines for annotating variant callsets and exporting them to elasticsearch
  ☆23Updated this week
• gogetdata / ggd-recipes
  conda recipes for genomic data
  ☆84Updated 4 years ago
• nextflow-io / cwl2nxf
  Import a CWL workflow specification to Nextflow script (experimental)
  ☆27Updated 7 years ago
• bcbio / bcbio_validation_workflows
  A community menagarie of automated variant validations using bcbio and the Common Workflow Language
  ☆21Updated 4 years ago
• ImperialCardioGenetics / frequencyFilter
  Allele frequency filtering for Mendelian variant discovery
  ☆18Updated 9 years ago
• MarWoes / viper
  VIPER (Variant InsPector and Expert Rating tool) can be utilised to view variant calls and decide whether or not those are true or false …
  ☆16Updated 3 years ago
• gatk-workflows / five-dollar-genome-analysis-pipeline
  Workflows used for WGS data processing -- replaced by https://github.com/gatk-workflows/gatk4-genome-processing-pipeline
  ☆57Updated 5 years ago
• gedoardo83 / GARFIELD-NGS
  GARFIELD-NGS: Genomic vARiants FIltering by dEep Learning moDels in NGS
  ☆17Updated 6 years ago
• Clinical-Genomics / chanjo
  Chanjo provides a better way to analyze coverage data in clinical sequencing.
  ☆50Updated 11 months ago