Steven-N-Hart / VariantDB_ChallengeLinks
Finding a scalable alternative to the VCF File for genomics analysis
☆14Updated 9 years ago
Alternatives and similar repositories for VariantDB_Challenge
Users that are interested in VariantDB_Challenge are comparing it to the libraries listed below
Sorting:
- robust matching of small variant datasets using flexible scoring schemes☆11Updated 5 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 7 years ago
- Toil workflows for common genomic pipelines☆33Updated 6 years ago
- A collection of well-known bioinformatics programs.☆25Updated 10 years ago
- SEQSpark documentation☆18Updated 5 years ago
- paplot creates various dynamic and interactive reports for cancer genome analysis.☆26Updated 3 years ago
- Allele frequency filter app☆14Updated 3 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- Trigger the Google Genomics Pipeline API with CWL☆11Updated 9 years ago
- variant integration methods for the 1000 Genomes Project☆21Updated 8 years ago
- Aligner for sequencing data☆18Updated 7 years ago
- Distributed execution of bioinformatics tools on Apache Spark. Apache 2 licensed.☆41Updated 11 months ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 6 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated last year
- EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…☆71Updated 2 years ago
- Allele frequency filtering for Mendelian variant discovery☆18Updated 9 years ago
- BigWig manpulation tools using libBigWig and htslib☆30Updated last year
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 4 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Updated 2 months ago
- GenoTypes Compressor☆16Updated 3 years ago
- Finding cryptic relationships to boost disease gene detection☆12Updated 2 years ago
- Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores …☆16Updated 7 years ago
- ☆13Updated 8 years ago
- Examples for the Google Genomics Pipelines API.☆50Updated 8 years ago
- variant discovery and annotation using GATK and Ensembl☆17Updated 12 years ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆30Updated 4 years ago
- An Open Platform for Harmonisation & Analysis of Sequencing & Phenotype Data☆33Updated 3 years ago
- Scalable RNA-seq analysis☆73Updated 5 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 8 years ago
- Biological Graphic tool in Python☆34Updated 5 years ago