bioinformatics plotting and tools
☆62Jun 3, 2024Updated 2 years ago
Alternatives and similar repositories for sanbomics
Users that are interested in sanbomics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Read fcs files.☆12Nov 13, 2025Updated 8 months ago
- ☆36Apr 24, 2026Updated 2 months ago
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆20Nov 18, 2022Updated 3 years ago
- Holds the code and data to reproduce the analyses of Danaher & Kim et a;, "Advances in mixed cell deconvolution enable quantification of …☆12Dec 8, 2021Updated 4 years ago
- One-liner for mapping orthologous genes in both R and python using ENSEMBL BioMART☆24Nov 11, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆12Dec 4, 2023Updated 2 years ago
- team lander github repo☆10Aug 7, 2021Updated 4 years ago
- Genomic interval operations on Pandas DataFrames☆193Updated this week
- Companion repository to Lause, Berens & Kobak (2021): "Analytic Pearson residuals for normalization of single-cell RNA-seq UMI data", Gen…☆40May 6, 2022Updated 4 years ago
- Generate Dose-Response Curves in Python☆13May 26, 2026Updated last month
- Feature-rich Python implementation of the tximport package for gene count estimation.☆44Jul 10, 2026Updated last week
- Initial recommendations for performing, benchmarking, and reporting single-cell proteomics experiments. The code is distributed under an …☆12Apr 5, 2023Updated 3 years ago
- autoprot provides standardised, fast, and reliable proteomics data analysis while ensuring a high customisability needed to tailor the an…☆12Apr 17, 2026Updated 3 months ago
- Flow & mass cytometry analytics.☆61Jul 13, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Scripts to generate and analyze afdb clusters☆11Sep 15, 2023Updated 2 years ago
- Analyze your RNA sequencing data without writing a single line of code☆140May 30, 2026Updated last month
- Interactive applications of stlearn☆16May 1, 2023Updated 3 years ago
- A Reproducible Untargeted Metabolomics Data Processing Pipeline☆11Mar 18, 2021Updated 5 years ago
- A collection of easy-to-use custom ggplot2-based functions for data exploration and analysis. Each function handles data preprocessing an…☆27Dec 23, 2025Updated 6 months ago
- Python3 package for plotting Venn diagrams (up to 4 sets)☆27Jun 5, 2026Updated last month
- ☆22Jul 7, 2022Updated 4 years ago
- Nextflow pipeline for hyperparameter optimization of machine learning models☆25May 26, 2026Updated last month
- (DRExM³L) Drug REpurposing using eXplainable Machine Learning and Mechanistic Models of signal transduction☆12Jun 5, 2026Updated last month
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Jupyter Notebook Tutorials for Machine Learning in Chemistry (MLChem)☆16Jan 25, 2026Updated 5 months ago
- Code related to scRNA analysis using the scAmpi workflow☆28Jun 24, 2026Updated 3 weeks ago
- ☆13Jan 29, 2021Updated 5 years ago
- Aligned Diffusion Schroedinger Bridges (UAI 2023)☆14Sep 18, 2025Updated 10 months ago
- Phenotype detection in pooled genetic perturbation screens☆12Mar 13, 2024Updated 2 years ago
- Dockerized Version of the DiffDock model from MIT☆13May 22, 2023Updated 3 years ago
- SEACells algorithm for Inference of transcriptional and epigenomic cellular states from single-cell genomics data☆192Mar 27, 2025Updated last year
- Strain resolved metagenome simulator☆13Aug 11, 2018Updated 7 years ago
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆68Mar 14, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Comprehensive survival analyses on the TCGA data.☆17Jun 10, 2022Updated 4 years ago
- ☆19Jul 6, 2023Updated 3 years ago
- ☆10Feb 12, 2019Updated 7 years ago
- A python tool to do comparative analysis of mulitple single cell datasets.☆21Oct 25, 2019Updated 6 years ago
- Functions to extract information from Oxford Nanopore sequencing data and alignments☆11Jun 15, 2026Updated last month
- Perturb-seq analysis package☆16May 2, 2024Updated 2 years ago
- scripts for microbiome analysis☆12Jul 25, 2024Updated last year