epigen / KPNNLinks
Knowledge-primed neural networks
☆38Updated 2 years ago
Alternatives and similar repositories for KPNN
Users that are interested in KPNN are comparing it to the libraries listed below
Sorting:
- ☆38Updated last year
- TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TC…☆25Updated 3 years ago
- Functional Embedding of Gene Signatures☆46Updated last year
- ☆43Updated last week
- Python package to load and query ARCHS4 data☆23Updated 3 months ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆69Updated last week
- Computational Optimization of DNA Activity (CODA)☆64Updated 6 months ago
- ☆18Updated last year
- Deep Learning Method to Identify Cancer Associated TCRs☆47Updated 3 years ago
- Prize-Collecting Steiner Forests for Interactomes☆62Updated last year
- HLA-II ligand predictor.☆45Updated 2 years ago
- MHC Class I and Class II neoantigen binding prediction☆32Updated 3 months ago
- ExplaiNN: interpretable and transparent neural networks for genomics☆49Updated 6 months ago
- CMap Notebooks for LINCS 2020 Workshop☆46Updated 4 years ago
- repository containing analysis scripts and auxiliary files☆36Updated 5 years ago
- ☆40Updated 5 years ago
- Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of …☆35Updated 6 months ago
- Predicting gene expression levels from genomic sequences☆54Updated 5 years ago
- flexible CDR based distance metrics☆67Updated last year
- Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data☆120Updated last month
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆29Updated 6 months ago
- SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence☆29Updated 11 months ago
- MONET : MOdularising NEtwork Toolbox - https://doi.org/10.1093/bioinformatics/btaa236☆47Updated 4 years ago
- ☆33Updated 2 years ago
- ☆27Updated 2 years ago
- NetTCR-2.0. Sequence-based prediction of peptide-TCR binding☆35Updated 3 years ago
- Connectivity Map analysis in MATLAB☆46Updated 3 years ago
- Code for "Optimizing 5’UTRs for mRNA-delivered gene editing using deep learning"☆23Updated last year
- CDR3 clustering module providing a new method for fast and accurate clustering of large data sets of CDR3 amino acid sequences, and offer…☆54Updated last year
- CLUMPS adapted to post-translational modifications.☆10Updated 5 months ago