mickaelleclercq / BioDiscMLLinks
Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data
☆31Updated 2 months ago
Alternatives and similar repositories for BioDiscML
Users that are interested in BioDiscML are comparing it to the libraries listed below
Sorting:
- insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…☆26Updated 8 years ago
- ☆19Updated 5 years ago
- Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit☆49Updated 2 years ago
- ☆34Updated 2 years ago
- GEDFN: Graph-Embedded Deep Feedforward Network☆23Updated 6 years ago
- pysster: Learning Sequence And Structure Motifs In Biological Sequences Using Convolutional Neural Networks☆86Updated 5 years ago
- jupyter notebook; perform differential gene expression analysis using DESeq2 on TCGA RNAseq data☆33Updated 6 years ago
- using shallow neural network layer (embedding) to infer gene-gene/sample relationship from gene expression data☆21Updated 6 years ago
- Data Integration tool utilizing network information for predictive analyses☆16Updated 4 months ago
- a python package for KEGG pathway enrichment analysis with multiple gene lists.☆36Updated 7 years ago
- ☆10Updated 5 years ago
- Code for the analyses in the human reference interactome paper.☆28Updated 2 years ago
- CMap Notebooks for LINCS 2020 Workshop☆46Updated 4 years ago
- Machine learning workflows for analyzing high-throughput protein data☆26Updated 8 years ago
- Standard set of data-loaders for training and making predictions for DNA sequence-based models.☆82Updated last year
- Cancer Drug Response prediction using a Recommender System☆42Updated 2 years ago
- iDeep: integrated prediction of RNA-protein binding sites using deep learning☆39Updated 5 years ago
- Deep proteome inference from peptide profiles☆13Updated 5 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated last year
- Prize-Collecting Steiner Forests for Interactomes☆62Updated last year
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis☆22Updated 2 years ago
- Python interface to running command-line and web-based MHC binding predictors☆98Updated last year
- Python API for Xena Hub☆53Updated 2 years ago
- Inference of gene dependency from RNAi screening datasets.☆19Updated 5 years ago
- Knowledge-primed neural networks☆38Updated 2 years ago
- 🏺 Exploring novel tumor epitope identification☆36Updated 5 years ago
- A deep learning approach for predicting high-confidence neoantigens by considering both the presentation possibilities of mutant peptides…☆44Updated 2 years ago
- ☆51Updated 4 years ago