arnor-sigurdsson / EIRLinks
A toolkit for training deep learning models on genotype, tabular, sequence, image, array and binary data.
☆42Updated 3 weeks ago
Alternatives and similar repositories for EIR
Users that are interested in EIR are comparing it to the libraries listed below
Sorting:
- Code for paper "A deep profile of gene expression across 18 human cancers"☆30Updated last year
- Clinical interpretation of somatic mutations in cancer☆50Updated 11 months ago
- ☆41Updated 7 months ago
- mantis-ml: Stochastic semi-supervised learning to prioritise genes from high throughput genomic screens☆30Updated 2 years ago
- Phenome Exome Association and Correlation Of Key phenotypes☆31Updated 4 years ago
- This repository houses scripts for training genetic scores of omic traits in INTERVAL☆28Updated 2 years ago
- Integrate Any Omics: Towards genome-wide data integration for patient stratification☆58Updated 8 months ago
- Extracting disease-specific genomic coordinates from GWAS catalog☆21Updated 6 years ago
- A pipeline for identifying indel derived neoantigens using RNA-Seq data☆30Updated 3 years ago
- Classifying tumor types based on Whole Genome Sequencing (WGS) data☆49Updated 2 years ago
- GenoTools: Advanced Genotype Data Analysis A robust suite for processing genotype data, offering genotype calling (.idat to PLINK), comp…☆31Updated last week
- Fast method for inferring cancer clonal population structure from SNV data.☆66Updated last week
- ☆87Updated 2 months ago
- ☆30Updated 7 months ago
- Proteome-Wide Association Study☆50Updated 4 years ago
- Cross-population polygenic prediction☆97Updated 2 months ago
- Modular framework for deep learning predictions on methylation data.☆55Updated 5 years ago
- ☆75Updated 4 years ago
- ☆10Updated 3 years ago
- A flexible framework for nucleosome profiling of cell-free DNA☆28Updated 2 years ago
- Explore and download data from the recount3 project☆37Updated 4 months ago
- Integrative pathway enrichment analysis of multivariate omics data☆119Updated 6 months ago
- 🏺 Exploring novel tumor epitope identification☆38Updated 5 years ago
- Python 2.7 implementation of network-based stratification (NBS) algorithm from Hofree et al (Nature Methods 2013)☆37Updated last year
- ☆68Updated last year
- Source code of FUMA GWAS web application☆59Updated 2 years ago
- MutSig2CV from Lawrence et al. 2014☆33Updated 5 years ago
- Framework for Interpretable Neural Networks☆114Updated 10 months ago
- A canonical correlation analysis based method for discovering (quantitative) trait-specific heterogeneous regulatory networks.☆32Updated last year
- Python module for genetic analyses☆17Updated 2 weeks ago