arnor-sigurdsson / EIRLinks
A toolkit for training deep learning models on genotype, tabular, sequence, image, array and binary data.
☆41Updated this week
Alternatives and similar repositories for EIR
Users that are interested in EIR are comparing it to the libraries listed below
Sorting:
- ☆40Updated 3 months ago
- GenoTools: Advanced Genotype Data Analysis A robust suite for processing genotype data, offering genotype calling (.idat to PLINK), comp…☆30Updated last month
- Python module for genetic analyses☆15Updated 2 months ago
- Classifying tumor types based on Whole Genome Sequencing (WGS) data☆48Updated last year
- ☆74Updated 4 years ago
- Code for paper "A deep profile of gene expression across 18 human cancers"☆27Updated 9 months ago
- Cross-population polygenic prediction☆90Updated 10 months ago
- mantis-ml: Stochastic semi-supervised learning to prioritise genes from high throughput genomic screens☆30Updated last year
- Modular framework for deep learning predictions on methylation data.☆55Updated 5 years ago
- This repository houses scripts for training genetic scores of omic traits in INTERVAL☆26Updated 2 years ago
- Source code of FUMA GWAS web application☆58Updated last year
- Extracting disease-specific genomic coordinates from GWAS catalog☆21Updated 5 years ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆85Updated 4 months ago
- A pipeline for identifying indel derived neoantigens using RNA-Seq data☆30Updated 3 years ago
- ☆66Updated 10 months ago
- Linear mixed model for genomic analyses.☆107Updated 4 years ago
- Clinical interpretation of somatic mutations in cancer☆47Updated 7 months ago
- This package helps wrangle the clinical data in IBD Plexus. IBD Plexus is a data exchange platform designed to accelerate research toward…☆17Updated 3 weeks ago
- DNA methylation studies of mammalian species☆37Updated last month
- SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence☆29Updated 10 months ago
- ☆10Updated 3 years ago
- A canonical correlation analysis based method for discovering (quantitative) trait-specific heterogeneous regulatory networks.☆29Updated last year
- Code accompanying The Evolutionary history of 2,658 cancers☆46Updated 4 years ago
- Configs and descriptions of circos plots created on FUMA web application☆15Updated 7 years ago
- Phenome Exome Association and Correlation Of Key phenotypes☆27Updated 4 years ago
- causal TWAS (cTWAS)☆45Updated last month
- Analyses conducting GWAS across the UKBB diverse superpopulations☆54Updated 4 months ago
- Netbooks is a JupyterHub catalog of use cases in gene regulatory network inference using netZoo methods..☆44Updated last week
- A network-based approach for exon set enrichment☆15Updated 2 months ago
- ☆82Updated 2 months ago