A toolkit for training deep learning models on genotype, tabular, sequence, image, array and binary data.
☆42Mar 1, 2026Updated this week
Alternatives and similar repositories for EIR
Users that are interested in EIR are comparing it to the libraries listed below
Sorting:
- Gaussian imputation of GWAS summary statistics☆15Apr 16, 2015Updated 10 years ago
- A rapido and lightweight method for PGS computation☆14Feb 19, 2025Updated last year
- Implementation of LTFH++☆11Nov 17, 2025Updated 3 months ago
- Genotype-based Prediction (GenoPred)☆77Feb 20, 2026Updated 2 weeks ago
- Polygenic prediction via continuous shrinkage priors☆198Nov 21, 2024Updated last year
- ☆13Feb 14, 2023Updated 3 years ago
- Based off of the official Rostlab & PredictProtein website installation, as of 2020-09-07, the produced Docker image from this repository…☆14Feb 13, 2023Updated 3 years ago
- SeqOthello supports fast coverage query and containment query.☆12May 8, 2019Updated 6 years ago
- Course in population genomics at BiRC☆12Feb 23, 2026Updated last week
- a novel next-generation sequencing simulator using position and genomic contexts based error profiles☆13Dec 18, 2020Updated 5 years ago
- A cookiecutter template that reflects my favored structure for setting up Snakemake-based analysis pipelines.☆16Jul 25, 2016Updated 9 years ago
- ☆14Jan 31, 2020Updated 6 years ago
- ☆17Apr 9, 2021Updated 4 years ago
- 180+ Java applications for analyzing next generation sequencing data from ChIPSeq, RNASeq, BisSeq, DNASeq, variant annotation/ filtering,…☆18Feb 19, 2026Updated 2 weeks ago
- SODAR: System for Omics Data Access and Retrieval☆19Updated this week
- CoMorMent-Containers☆36Feb 23, 2026Updated last week
- The shiny app that accompanies the ngsReports R package☆13Jun 10, 2021Updated 4 years ago
- A multi-ancestry polygenic risk score approach☆20Jul 20, 2024Updated last year
- R package for the analysis of massive SNP arrays.☆219Aug 21, 2025Updated 6 months ago
- Functional Associations using Variational Autoencoders☆43Jan 19, 2026Updated last month
- Comprehensive Human Expressed SequenceS☆19Jul 13, 2025Updated 7 months ago
- Very large scale k-mer counting and analysis on Apache Spark.☆18Updated this week
- Course of Machine Learning for Biomedical Data -TECNUN University of Navarra☆12Feb 20, 2026Updated 2 weeks ago
- Statistical properties of polygenic risk scores☆19Oct 16, 2019Updated 6 years ago
- ☆50Jun 24, 2025Updated 8 months ago
- Proteome-Wide Association Study☆50Apr 4, 2021Updated 4 years ago
- Prediction of mRNA subcellular localization using deep recurrent neural networks☆15Jul 19, 2019Updated 6 years ago
- A tool to calculate ploidy levels from genotype likelihoods and coverage using Hidden Markov Models☆18Nov 29, 2022Updated 3 years ago
- ☆26Oct 8, 2025Updated 4 months ago
- 📺 Discover the latest machine learning / AI courses on YouTube.☆24Nov 26, 2023Updated 2 years ago
- Lossless VCF compression☆21Mar 4, 2022Updated 4 years ago
- SPACE: STRING proteins as complementary embeddings☆37Feb 18, 2026Updated 2 weeks ago
- Load genomic BAM files using Apache Spark☆21Jun 17, 2018Updated 7 years ago
- Work for the tree sequence inference paper.☆23Oct 19, 2020Updated 5 years ago
- Integrate Any Omics: Towards genome-wide data integration for patient stratification☆58May 19, 2025Updated 9 months ago
- Evolution simulator with extinct lineages☆25Apr 3, 2025Updated 11 months ago
- Analysis of inference methods on standard population models☆25Dec 3, 2021Updated 4 years ago
- Learn tissue-specificity and tissue-sharing of genetic regulation across 49 tissues using constraint matrix factorization model☆22Oct 9, 2020Updated 5 years ago
- Bioconductor package that makes BIG data pint-sized.☆21Feb 12, 2024Updated 2 years ago