Codes for our paper "UniMoMo: Unified Generative Modeling of 3D Molecules for De Novo Binder Design" (ICML 2025)
☆99Dec 7, 2025Updated 10 months ago
Alternatives and similar repositories for UniMoMo
Users that are interested in UniMoMo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆134Apr 16, 2025Updated last year
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆112May 25, 2025Updated last year
- ☆14Oct 16, 2025Updated last year
- Codes for our paper "Programming Biomolecular Interactions with All-Atom Generative Model"☆111Jun 6, 2026Updated 5 months ago
- ☆100Oct 23, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Official repository for the paper "Peptide design through binding interface mimicry with PepMimic" accepted by Nature Biomedical Engineer…☆43Sep 17, 2026Updated last month
- Official repository for DiffPepBuilder and DiffPepDock tools☆135Oct 24, 2025Updated last year
- Implementation of PocketXMol, the pocket-interacting molecular generative foundation model.☆264Mar 22, 2026Updated 7 months ago
- Official implementation for our paper: Repurposing AlphaFold3-like Protein Folding Models for Antibody Sequence and Structure Co-design☆48Jan 8, 2026Updated 9 months ago
- This is the official repository for our paper "UniSim: A Unified Simulator for Time-Coarsened Dynamics of Biomolecules" published in ICML…☆19Apr 14, 2026Updated 6 months ago
- The official code of SurfDesign (KDD 2026 AI4Science)☆19May 19, 2026Updated 5 months ago
- de novo design of high affinity biological binders☆204Sep 1, 2026Updated 2 months ago
- A cyclic peptide-protein complex dataset derived from AFDB.☆71Oct 29, 2026Updated last week
- Official implementation of CP-Composer. It is the released code of 《Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints》…☆34Aug 6, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Reinforcement learning based cyclic peptide binder design☆20Jul 22, 2025Updated last year
- List of papers about Peptide research using Deep Learning☆52Oct 3, 2026Updated last month
- Official Implementation of IgGM☆238May 28, 2026Updated 5 months ago
- Generative model for protein binder design for protein and small molecule targets. Combines a pretrained flow-based generative model (bui…☆469Oct 22, 2026Updated 2 weeks ago
- ☆11May 14, 2025Updated last year
- This repo contains the codes for our paper "Generalist Equivariant Transformer Towards 3D Molecular Interaction Learning" (ICML 2024).☆52Jul 4, 2025Updated last year
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆370Jun 29, 2023Updated 3 years ago
- [ICLR 2025] Hotspot-Driven Peptide Design via Multi-Fragment Autoregressive Extension☆20May 5, 2025Updated last year
- ICLR 2025 paper: 3DMolFormer: A Dual-channel Framework for Structure-based Drug Discovery☆33Apr 25, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Repo of AntiBMPNN project for antibody sequence design.☆59May 28, 2025Updated last year
- Official repository of "ODesign: A World Model for Biomolecular Interaction Design"☆352Jul 1, 2026Updated 4 months ago
- Official repository for MolCRAFT series☆160Oct 27, 2025Updated last year
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆135Feb 26, 2025Updated last year
- A Unified Evaluation Suite for Protein Design☆142Jan 27, 2026Updated 9 months ago
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆112Apr 7, 2023Updated 3 years ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆281Jul 24, 2025Updated last year
- The official implementation of 3D Equivariant Diffusion for Target-Aware Molecule Generation and Affinity Prediction (ICLR 2023)☆351Jan 10, 2024Updated 2 years ago
- Official repository of PXDesign☆273Dec 31, 2025Updated 10 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- BoltzGen: Toward Universal Binder Design☆1,100Updated this week
- Biomolecular co-folding, binder filtering, and nanobody design☆95Jun 28, 2026Updated 4 months ago
- A deep learning framework for predicting interactions between protein-protein interaction targets and modulators☆16Dec 2, 2023Updated 2 years ago
- [ICLR 2025 Spotlight] Boltzmann-Aligned Inverse Folding Model as a Predictor of Mutational Effects on Protein-Protein Interactions☆45Mar 10, 2025Updated last year
- ICLR 2026☆23Nov 20, 2025Updated 11 months ago
- The Family of Diffusion Protein Language Models (DPLM)☆350Jul 25, 2025Updated last year
- Toward High-Accuracy Open-Source Biomolecular Structure Prediction.☆2,104Sep 21, 2026Updated last month