☆24Jun 27, 2023Updated 2 years ago
Alternatives and similar repositories for IRFinder
Users that are interested in IRFinder are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Detecting intron retention from RNA-Seq experiments☆54Jul 17, 2024Updated last year
- cgat-flow repository☆16Sep 23, 2025Updated 7 months ago
- Published methods☆15Oct 19, 2016Updated 9 years ago
- ☆12Feb 19, 2021Updated 5 years ago
- apa: research platform for the study of alternative polyadenylation, expressRNA.org☆12Sep 2, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- fast webservices based query tool for large sets of genomic features☆26May 10, 2025Updated 11 months ago
- Browser-based tool for visualizing and analyzing germline copy number variants in genomic data☆11Nov 7, 2024Updated last year
- CLIP Tool Kit (CTK)☆21Apr 28, 2024Updated 2 years ago
- cgat-apps repository☆36Apr 9, 2025Updated last year
- pybio is a comprehensive Python framework designed to streamline genomics operations. It offers a direct interface to Ensembl genome asse…☆15Oct 28, 2025Updated 6 months ago
- Scripts for the analysis of TT-seq and DRB/TT-seq data.☆11Mar 11, 2020Updated 6 years ago
- iread☆25Jul 16, 2021Updated 4 years ago
- A deep learning method for the prediction of internal ribosome entry sites (IRES) of circRNAs☆17Jul 6, 2025Updated 9 months ago
- ☆13Apr 7, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Code to reproduce analyses and figures for Kamath et al., 2022☆13May 5, 2022Updated 3 years ago
- Step-wise assembly of the neonatal virome modulated by breast feeding.☆11Aug 20, 2021Updated 4 years ago
- ☆12Aug 21, 2023Updated 2 years ago
- Single-cell genomic sequencing of the human gut microbiome☆12Jun 12, 2024Updated last year
- Skautský discord bot☆11Feb 12, 2026Updated 2 months ago
- A package for quantifying transposable elements at a locus level for RNAseq datasets.☆31Jan 30, 2026Updated 2 months ago
- Bioinformatic tools (R scripts) for the analysis of Absolute Quantification of Architecture (AQuA-HiChIP) style data.☆12Sep 12, 2025Updated 7 months ago
- Template for a computational lab notebook using bookdown☆13Mar 16, 2018Updated 8 years ago
- ☆16Jul 29, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆27Oct 22, 2025Updated 6 months ago
- conserved non-coding sequence☆17Feb 21, 2022Updated 4 years ago
- Create a citation graph from pubmed data using R☆10Nov 4, 2016Updated 9 years ago
- Extract longest transcript or longest CDS transcript from GTF annotation file or gencode transcripts fasta file.☆21Mar 25, 2022Updated 4 years ago
- ☆38Apr 20, 2026Updated last week
- Simultaneous multi-sample transcript assembler for RNA-seq data☆18Dec 13, 2024Updated last year
- Custom scripts for monotreme genome project☆19Jan 12, 2021Updated 5 years ago
- RNA-seq Quantification of Alternative Polyadenylation☆53Mar 21, 2026Updated last month
- ☆16Nov 25, 2019Updated 6 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- R package for nucleotide conversion sequencing data analysis☆17Jan 13, 2026Updated 3 months ago
- ☆16May 7, 2023Updated 2 years ago
- Demultiplexing and debarcoding tool designed for LR-Split-seq data.☆25Oct 19, 2023Updated 2 years ago
- Analysis pipeline for Ribosome footprinting data☆25Jan 29, 2026Updated 3 months ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆22Jun 28, 2024Updated last year
- Nextflow workflow for automatic repeat detection, classification and masking☆13Feb 19, 2018Updated 8 years ago
- ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.☆25Dec 5, 2024Updated last year