imbforge / NGSpipe2goLinks
a set of NGS pipelines
☆24Updated this week
Alternatives and similar repositories for NGSpipe2go
Users that are interested in NGSpipe2go are comparing it to the libraries listed below
Sorting:
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- A small R package to make sequencing read coverage plots in R.☆39Updated 3 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- R package wrapping bedtools☆43Updated 5 months ago
- A comprehensive toolkit for mutational signature analysis☆41Updated last year
- DriverPower☆26Updated 7 months ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated last year
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- ☆23Updated 4 years ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆36Updated last year
- ☆38Updated 4 years ago
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆17Updated last year
- CNV analysis workflow code for the manuscript☆13Updated 5 years ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 4 months ago
- 📊 An R package of RNA-seq workflow☆15Updated 3 years ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post…☆27Updated 2 months ago
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆28Updated 3 years ago
- Merge fastq files split over lanes☆20Updated 7 years ago
- 📊Evaluating, filtering, comparing, and visualising VCF☆28Updated 2 years ago
- ☆32Updated 9 months ago
- Pipelines for NGS data preprocessing by the Bock lab and friends☆21Updated 3 years ago
- RNA-seq analysis scripts☆15Updated last month
- Flexible Bayesian inference of mutational signatures☆36Updated 2 years ago
- ChIP-seq DC and QC Pipeline☆36Updated 4 years ago
- Codes and Data for FFPEsig manuscript☆17Updated last year
- Transcriptome-wide network☆16Updated 6 years ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 6 months ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆53Updated last month
- RNA-seq workflow: differential transcript usage☆22Updated 2 years ago