imbforge / NGSpipe2goLinks
a set of NGS pipelines
☆24Updated last month
Alternatives and similar repositories for NGSpipe2go
Users that are interested in NGSpipe2go are comparing it to the libraries listed below
Sorting:
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- A small R package to make sequencing read coverage plots in R.☆40Updated last month
- Flexible Bayesian inference of mutational signatures☆38Updated 2 years ago
- DriverPower☆26Updated 11 months ago
- RNA-seq workflow: differential transcript usage☆23Updated 2 years ago
- Pipelines for NGS data preprocessing by the Bock lab and friends☆22Updated 3 years ago
- R package wrapping bedtools☆44Updated 9 months ago
- workshop website on readthedocs☆21Updated 3 months ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- DRAGEN Tumor/Normal workflow post-processing☆25Updated 2 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- ☆23Updated 4 years ago
- Documentation for vcfR☆11Updated 7 months ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated 3 weeks ago
- Readme☆10Updated 5 years ago
- Sashimi plots for RNA-seq data using detected transcripts☆29Updated 9 months ago
- 📊 An R package of RNA-seq workflow☆15Updated 3 years ago
- Merge fastq files split over lanes☆20Updated 7 years ago
- GTEx analysis scripts☆20Updated 8 years ago
- A comprehensive toolkit for mutational signature analysis☆42Updated last year
- Scripts and software supplement for "Gene-level differential analysis at transcript-level resolution" by Yi, Pimentel, Bray and Pachter☆19Updated 7 years ago
- Mapped QC analysis program☆44Updated 7 years ago
- Isoform-level functional RNA-Seq analysis 🧬☆35Updated last month
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆42Updated last year
- ☆34Updated last month
- Differential expression and allelic analysis, nonparametric statistics☆30Updated 11 months ago
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆37Updated 4 years ago
- highly-efficient & lightweight mutation signature matrix aggregation☆19Updated 3 years ago
- interactive plots for differential expression analysis☆34Updated 6 months ago