a set of NGS pipelines
☆24Mar 10, 2026Updated last week
Alternatives and similar repositories for NGSpipe2go
Users that are interested in NGSpipe2go are comparing it to the libraries listed below
Sorting:
- Analysis of Dual RNA-seq data - an experimental method for interrogating host-pathogen interactions through simultaneous RNA-seq.☆25Jun 26, 2025Updated 8 months ago
- Pipelines for NGS, imputation, gwas, ...☆29Dec 18, 2019Updated 6 years ago
- GenomeTools: Scripts and Classes for Working with Genomic Data☆12Jun 7, 2018Updated 7 years ago
- Collection of CGAT NGS Pipelines☆43Nov 8, 2018Updated 7 years ago
- Readme☆10Mar 15, 2020Updated 6 years ago
- RNA-seq analysis scripts☆16Jan 8, 2026Updated 2 months ago
- A course with Jupyter Notebooks for Computational Population Genetics☆10Sep 4, 2022Updated 3 years ago
- Pipelines for NGS data preprocessing by the Bock lab and friends☆22Aug 29, 2022Updated 3 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 2 years ago
- [知识管理]A simple yet powerful blog system for reading and organizing txt/Markdown/html files, based on PHP. 订阅/关注请点顶部的 Watch,收藏/点赞请点顶部的Sta…☆17Feb 24, 2026Updated 3 weeks ago
- Various scripts that I have created that are useful for genome annotation (repeats & proteins)☆16Feb 21, 2022Updated 4 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated last year
- ☆10Jan 20, 2023Updated 3 years ago
- NGS DNA best practice pipeline for Illumina sequencing - alignment, variant calling, annotation and QC☆18Aug 22, 2025Updated 6 months ago
- Pipelines for analyzing genomic or transcriptomic data☆17Feb 29, 2024Updated 2 years ago
- ☆10Feb 25, 2024Updated 2 years ago
- PyPop: Python for Population Genomics☆25Updated this week
- ☆11Jun 23, 2017Updated 8 years ago
- Repository☆10Oct 23, 2024Updated last year
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- Scripts of population genomics analysis☆36May 8, 2018Updated 7 years ago
- Bpipe - a tool for running and managing bioinformatics pipelines☆239Mar 6, 2026Updated 2 weeks ago
- visualization of phylogenetic output files☆14Oct 23, 2023Updated 2 years ago
- Scripts to convert between file formats for various analyses☆16May 10, 2025Updated 10 months ago
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆14Jan 31, 2024Updated 2 years ago
- Publication Page for the Noack et al. 2021 Nature Neuroscience paper☆10Feb 7, 2022Updated 4 years ago
- Pipeline for poreathon☆14Dec 17, 2014Updated 11 years ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Feb 26, 2026Updated 3 weeks ago
- Read PLINK BED/BIM/FAM files into R☆45Jul 26, 2021Updated 4 years ago
- toolkit to process gtf files☆17Dec 24, 2021Updated 4 years ago
- Collection of notes and scripts related to NGS☆14Feb 18, 2026Updated last month
- Iterative error correction of long reads☆13Dec 9, 2022Updated 3 years ago
- Gene Prediction using MAKER, CEGMA, SNAP, GENEMARK & AUGUSTUS☆10Jul 20, 2017Updated 8 years ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- RMarkdown to Github Jekyll md☆15Dec 22, 2017Updated 8 years ago
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 5 years ago
- ☆13Nov 2, 2017Updated 8 years ago
- A tool for Read Multi-Mapper Resolution☆24Feb 15, 2017Updated 9 years ago
- A scalable variant calling and benchmarking framework supporting both short and long reads.☆14Sep 28, 2025Updated 5 months ago