Alternatives and similar repositories for bioc-rnaseq:

Users that are interested in bioc-rnaseq are comparing it to the libraries listed below

• waldronlab / MultiAssayWorkshop
  Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment
  ☆20Updated last year
• Bioconductor / BiocWorkshops2019
  The official repository of the Bioconductor 2019 Conference Workshops
  ☆25Updated 2 years ago
• waldronlab / enrichOmics
  Functional enrichment analysis of high-throughput omics data
  ☆20Updated 3 months ago
• leekgroup / networks_correction
  Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"
  ☆16Updated 5 years ago
• ConesaLab / MultiPower
  Statistical power studies for multi-omics experiments.
  ☆31Updated 2 months ago
• Core-Bioinformatics / bulkAnalyseR
  ☆27Updated last year
• kevinblighe / CorLevelPlot
  Visualise correlation results and test significancies of these
  ☆23Updated 5 years ago
• carpentries-incubator / bioc-project
  Introduction to the Bioconductor project
  ☆18Updated this week
• federicomarini / ideal
  Interactive Differential Expression AnaLysis - DE made accessible and reproducible
  ☆29Updated last month
• PhanstielLab / bedtoolsr
  R package wrapping bedtools
  ☆39Updated 3 weeks ago
• sa-lee / superintronic
  A tidy interface for coverage analysis
  ☆24Updated 5 years ago
• OSU-BMBL / IRIS
  A Shiny web server for interactive visualization and analysis of RNA-seq data
  ☆23Updated 4 years ago
• bigbioinformatics / single_cell_rna_seq_workshop
  repository for the single cell RNA-Seq workshop
  ☆27Updated 3 years ago
• jokergoo / KeywordsEnrichment
  ☆32Updated last year
• lpantano / DEGreport
  Create a cromphensive report of DEG list coming from any analysis of RNAseq data
  ☆24Updated last year
• stephenturner / mergelanes
  Merge fastq files split over lanes
  ☆20Updated 7 years ago
• drisso / peixoto2015_tutorial
  Tutorial to reproduce the analysis of Peixoto et al. (2015)
  ☆9Updated 9 years ago
• montilab / BS831
  Course Materials for Genomics Data Mining
  ☆22Updated 2 months ago
• szenitha / Shiny-Seq
  Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data
  ☆16Updated 7 years ago
• moosa-r / rbioapi
  rbioapi: User-Friendly R Interface to Biologic Web Services' API
  ☆21Updated 2 months ago
• tidyomics / tidyomicsBlog
  the manifesto, workshops and tutorials of the tidy transcriptomics
  ☆12Updated this week
• btmonier / vidger
  Make rapid visualizations of RNA-seq data in R
  ☆19Updated 5 years ago
• nasqar / ClusterProfShinyGSEA
  A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries
  ☆18Updated 5 years ago
• montilab / hypeR
  An R Package for Geneset Enrichment Workflows
  ☆76Updated 3 weeks ago
• mani2012 / BatchQC
  Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.
  ☆35Updated last year
• BIMSBbioinfo / pigx_rnaseq
  Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline
  ☆21Updated 3 months ago
• ge11232002 / TFBSTools
  Software Package for Transcription Factor Binding Site (TFBS) Analysis
  ☆28Updated last month
• GangLiLab / genekitr
  🧬 Gene analysis toolkit based on R
  ☆56Updated 3 months ago
• stemangiola / bioc_2020_tidytranscriptomics
  Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
  ☆26Updated 4 years ago
• gersteinlab / exceRpt
  Software for preprocessing, filtering, alignment, and reporting of smallRNA-seq datasets
  ☆22Updated 2 years ago