ggit12 / anndictionaryLinks
Conveniently process a dictionary of anndatas
☆21Updated 4 months ago
Alternatives and similar repositories for anndictionary
Users that are interested in anndictionary are comparing it to the libraries listed below
Sorting:
- Multi-modal single cell analysis pipelines☆61Updated last week
- Information-based dimensionality reduction☆29Updated last year
- Hotspot cluster distance analysis in spatial transcriptomic data☆33Updated 10 months ago
- ☆19Updated last year
- ☆44Updated last month
- Visualizing Somatic Alterations of 10X Spatial Transcriptomics Data☆14Updated last year
- iterative clustering pipeline of big single cell datasets.☆35Updated 3 months ago
- Individual level Differential Expression Analysis for Single cells☆26Updated 2 years ago
- Gene regulatory network inference for RNA velocity and pseudotime data☆27Updated last month
- An R package for performing cell typing in SMI and other single cell data☆44Updated 7 months ago
- ☆23Updated 2 months ago
- Analyzing cellular niches in spatial transcriptomics data☆33Updated last year
- A modular tool for proportion analysis in single-cell sequencing data☆24Updated 3 months ago
- a scalable python suite for tree inference and advanced pseudotime analysis from scRNAseq data.☆64Updated last week
- ☆35Updated 9 months ago
- scAR (single-cell Ambient Remover) is a deep learning model for removal of the ambient signals in droplet-based single cell omics☆56Updated last year
- CellANOVA: Cell State Space Analysis of Variance for signal recovery in single cell batch integration☆53Updated last year
- cell type specific, trait-associated gene regulation☆29Updated 8 months ago
- ☆53Updated 2 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Updated 9 months ago
- STHD: probabilistic cell typing of Single spots in whole Transcriptome spatial data with High Definition☆35Updated 7 months ago
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆21Updated 2 months ago
- CAST package☆41Updated last year
- Weakly supervised learning uncovers phenotypic signatures in single-cell data☆36Updated this week
- Automated cell filtering for single-cell RNA sequencing data☆25Updated 2 years ago
- ☆23Updated 2 years ago
- Python package to perform normalization and variance-stabilization of single-cell data☆25Updated 5 months ago
- .h5mu files interface for Seurat☆32Updated 2 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated 3 months ago
- ☆22Updated 3 years ago