BenoitMorel / ParGenes
A massively parallel tool for model selection and tree inference on thousands of genes
☆41Updated 8 months ago
Related projects ⓘ
Alternatives and complementary repositories for ParGenes
- Automated de novo assembly of whole chloroplast genomes.☆44Updated last month
- Alignment-based retrieval and concatenation of phylogenetic markers from whole genome sequence (WGS) data☆34Updated 6 months ago
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆43Updated 4 years ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆32Updated last year
- Tutorial about R package PopGenome☆40Updated 5 years ago
- ☆21Updated 10 years ago
- paml documentation and tutorials☆45Updated last year
- ☆38Updated last year
- Quantifying Introgression via Branch Lengths☆49Updated 2 years ago
- Bioinformatic pipeline for processing Sequence Capture data for Phylogenetics☆21Updated last year
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆30Updated 8 months ago
- Implementation of the TreeShrink problem☆36Updated last month
- A tool to infer species tree and phylogenetic network from multilocus data☆32Updated 4 years ago
- a UNIX shell toolkit for processing and analyzing multiple sequence alignments and phylogenies☆59Updated last week
- Synteny Imager☆60Updated 2 months ago
- Alignment-Based Sequence extraction☆14Updated 2 years ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆67Updated 3 years ago
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆30Updated 2 years ago
- Generates an NCBI .tbl file of annotations on a genome.☆64Updated 6 years ago
- Scripts for file processing and analysis in phylogenetics and phylogeography☆11Updated 3 years ago
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆49Updated last month
- Bayesian molecular clock dating tutorial with genome-scale datasets☆16Updated 2 years ago
- Pipelines and tools for the processing of ancient and modern HTS data.☆43Updated 2 months ago
- spruceup☆20Updated 2 months ago
- Automatically exported from code.google.com/p/prottest3☆34Updated 6 years ago
- ☆16Updated 3 years ago
- Tutorials on evolutionary genomics☆41Updated 2 years ago
- Hybridization detection using phylogenetic invariants☆41Updated last week
- ☆42Updated 7 years ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆54Updated 2 weeks ago