BackofenLab / GraphClust-2
A pipeline for structural clustering of RNA secondary structures
☆15Updated 3 years ago
Alternatives and similar repositories for GraphClust-2:
Users that are interested in GraphClust-2 are comparing it to the libraries listed below
- Comparison of Adaptive Immune Receptor Repertoires☆26Updated last year
- Galaxy RNA workbench☆39Updated 4 years ago
- visual analysis of your VCF files☆30Updated 2 years ago
- ☆33Updated 4 months ago
- a python package for KEGG pathway enrichment analysis with multiple gene lists.☆35Updated 7 years ago
- RIblast is ultrafast RNA-RNA interaction prediction software based on seed-and-extension algorithm for comprehensive lncRNA interactome a…☆16Updated last year
- Tool package to perform in-silico CRISPR analysis and assessment☆22Updated 8 months ago
- G4Hunter (2012_2015)- IECB - Bordeaux☆13Updated 4 years ago
- MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect☆25Updated 7 months ago
- iCount, protein-RNA interaction analytics☆23Updated 3 years ago
- ✂️ Deep learning-based splice site predictor that improves spliced alignments☆41Updated this week
- On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs☆16Updated 3 months ago
- gatk4 RNA variant calling pipeline☆40Updated this week
- BACNET is a Java based platform to develop website for multi-omics analysis☆13Updated last year
- ☆30Updated 4 years ago
- Efficient target prediction incorporating accessibility of interaction sites☆46Updated 2 months ago
- Ultra-fast 5' and 3' demultiplexer☆26Updated 8 months ago
- Comprehensive and scalable differential splicing analyses☆14Updated 6 months ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆36Updated last week
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆20Updated last year
- Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9…☆21Updated last month
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated 8 months ago
- Computational framework to identify promoter sequences from RNA-seq datasets☆10Updated last year
- The Zavolab Automated RNA-seq Pipeline☆35Updated 3 weeks ago
- Saluki, a method to predict mRNA half-lives from sequence☆22Updated 2 years ago
- Python package to plot sequence logos☆29Updated last year
- Parse GFF3 into Pandas dataframes☆26Updated 10 months ago
- FInding REliable Variants without ArTifacts☆22Updated 2 years ago
- FASTAptamer: A Bioinformatic Toolkit for High-Throughput Sequence Analysis of Combinatorial Selections☆10Updated 3 months ago
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated 7 months ago