BackofenLab / GraphClust-2Links
A pipeline for structural clustering of RNA secondary structures
☆15Updated 4 years ago
Alternatives and similar repositories for GraphClust-2
Users that are interested in GraphClust-2 are comparing it to the libraries listed below
Sorting:
- a python package for KEGG pathway enrichment analysis with multiple gene lists.☆36Updated 7 years ago
- Predicting gene expression levels from genomic sequences☆54Updated 5 years ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- iCodon customizes gene expression based on the codon composition☆15Updated last year
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆59Updated last week
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆33Updated 2 years ago
- GraphProt: modelling binding preferences of RNA-binding proteins☆20Updated 7 years ago
- Code from "Deep Learning Of The Regulatory Grammar Of Yeast 5′ Untranslated Regions From 500,000 Random Sequences"☆15Updated 7 years ago
- Saluki, a method to predict mRNA half-lives from sequence☆25Updated 2 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆31Updated last year
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆40Updated last week
- off-targeting assessment of Cas9 gRNAs☆13Updated 4 years ago
- ☆67Updated 6 months ago
- EditR: an algorithm for simple and cost effective measurement of base editing by quantifying Sanger trace fluorescence☆32Updated 2 years ago
- Ultra-fast 5' and 3' demultiplexer☆28Updated last year
- RIblast is ultrafast RNA-RNA interaction prediction software based on seed-and-extension algorithm for comprehensive lncRNA interactome a…☆17Updated 2 years ago
- Making bioinformatics fun again☆74Updated 3 months ago
- MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect☆28Updated 3 weeks ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆38Updated last week
- ☆38Updated last year
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆34Updated last year
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆38Updated 3 months ago
- Comprehensive Python client for the Uniprot REST API☆50Updated 3 months ago
- ☆23Updated last year
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated last year
- Python package to plot sequence logos☆29Updated last year
- G4Hunter (2012_2015)- IECB - Bordeaux☆16Updated 5 years ago
- Hclust2 is a handy tool for plotting heat-maps with several useful options to produce high quality figures that can be used in publicatio…☆12Updated 2 years ago
- Efficient target prediction incorporating accessibility of interaction sites☆48Updated last month
- Python port of the R Bioconductor `seqLogo` package☆35Updated last year