Alternatives and similar repositories for forgi

Users that are interested in forgi are comparing it to the libraries listed below

• ViennaRNA / forna
  Create force-directed graphs of RNA secondary structures.
  ☆105Updated 5 years ago
• nf-core / proteinfold
  Protein 3D structure prediction pipeline
  ☆86Updated this week
• dincarnato / RNAFramework
  RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
  ☆40Updated last month
• Lattice-Automation / seqfold
  nucleic acid folding
  ☆101Updated 2 weeks ago
• r2dt-bio / R2DT
  Visualise RNA secondary structure in consistent, reproducible and recognisable layouts
  ☆74Updated last month
• Benjamin-Lee / CodonAdaptationIndex
  Python Implementation of Codon Adaption Index
  ☆37Updated 2 years ago
• cusbg / traveler
  Template-based RNA secondary structure visualization
  ☆26Updated 9 months ago
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆51Updated 2 months ago
• boscoh / uniprot
  retrieve protein sequence identifiers and metadata from http://uniprot.org
  ☆68Updated 3 years ago
• fteufel / signalp-6.0
  Multi-class signal peptide prediction and structure decoding model.
  ☆91Updated 6 months ago
• FowlerLab / Enrich2
  Tool for deep mutational scanning experiments.
  ☆54Updated 5 months ago
• gecrooks / weblogo
  WebLogo 3: Sequence Logos redrawn
  ☆153Updated 3 months ago
• eternagame / draw_rna
  Draw RNA secondary structures in python.
  ☆48Updated 2 months ago
• ebi-uniprot / ProtVista
  A BioJS viewer for protein sequence features
  ☆51Updated 2 years ago
• UCLOrengoGroup / cath-tools
  Protein structure comparison tools such as SSAP and SNAP
  ☆64Updated last year
• moshi4 / pyMSAviz
  MSA(Multiple Sequence Alignment) visualization python package for sequence analysis
  ☆142Updated 8 months ago
• althonos / rich-msa
  A Rich renderable for viewing Multiple Sequence Alignments in the terminal.
  ☆85Updated 3 years ago
• ntranoslab / esm-variants
  ☆77Updated last year
• Lattice-Automation / primers
  A PCR primer tool for DNA assembly flows
  ☆33Updated last year
• jbloomlab / dms_tools2
  software for the analysis and visualization of deep mutational scanning data
  ☆34Updated 2 years ago
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆94Updated last year
• refresh-bio / FAMSA
  Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)
  ☆199Updated last month
• santiago1234 / iCodon
  iCodon customizes gene expression based on the codon composition
  ☆15Updated last year
• ebi-jdispatcher / webservice-clients
  A collection of Web Service Clients to consume EBI's Job Dispatcher tools via REST APIs
  ☆54Updated last year
• TimoLassmann / kalign
  A fast multiple sequence alignment program.
  ☆145Updated last month
• dosorio / Peptides
  An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
  ☆89Updated last year
• benchling / clustalo-python
  A Python wrapper around Clustal Omega (http://www.clustal.org/omega/)
  ☆25Updated 3 years ago
• nf-core / epitopeprediction
  A bioinformatics best-practice analysis pipeline for epitope prediction and annotation
  ☆48Updated 3 weeks ago
• andrewguy / biostructmap
  A Python package for mapping sequence aligned data onto protein structures
  ☆35Updated 4 years ago
• TurtleTools / caretta
  A software-suite to perform multiple protein structure alignment and structure feature extraction.
  ☆30Updated 2 years ago