Alternatives and similar repositories for forgi:

Users that are interested in forgi are comparing it to the libraries listed below

• dincarnato / RNAFramework
  RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
  ☆38Updated last month
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆90Updated last year
• r2dt-bio / R2DT
  Visualise RNA secondary structure in consistent, reproducible and recognisable layouts
  ☆72Updated this week
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆49Updated 8 months ago
• ntranoslab / esm-variants
  ☆73Updated last year
• nf-core / proteinfold
  Protein 3D structure prediction pipeline
  ☆79Updated this week
• lehner-lab / DiMSum
  An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies
  ☆31Updated 2 weeks ago
• dmnfarrell / epitopepredict
  Python package and command line tool for epitope prediction
  ☆51Updated 9 months ago
• FowlerLab / Enrich2
  Tool for deep mutational scanning experiments.
  ☆49Updated last month
• brineylab / abstar
  VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.
  ☆42Updated 3 weeks ago
• cusbg / traveler
  Template-based RNA secondary structure visualization
  ☆26Updated 5 months ago
• andrewguy / biostructmap
  A Python package for mapping sequence aligned data onto protein structures
  ☆35Updated 3 years ago
• eternagame / EternaFold
  Improving RNA structure prediction through multitask learning on diverse crowdsourced data.
  ☆58Updated 9 months ago
• Lattice-Automation / seqfold
  nucleic acid folding
  ☆91Updated 9 months ago
• dosorio / Peptides
  An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
  ☆85Updated last year
• DasLab / draw_rna
  Draw RNA secondary structures in python.
  ☆48Updated 8 months ago
• satoken / centroid-rna-package
  Centroid RNA package
  ☆19Updated 4 years ago
• nf-core / epitopeprediction
  A bioinformatics best-practice analysis pipeline for epitope prediction and annotation
  ☆44Updated this week
• boscoh / uniprot
  retrieve protein sequence identifiers and metadata from http://uniprot.org
  ☆67Updated 3 years ago
• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆41Updated 3 years ago
• davidhoover / DNAWorks
  Automatic oligonucleotide design for PCR-based gene synthesis
  ☆44Updated 5 years ago
• soedinglab / MMseqs2-App
  MMseqs2 app to run on your workstation or servers
  ☆78Updated last week
• fteufel / signalp-6.0
  Multi-class signal peptide prediction and structure decoding model.
  ☆84Updated 3 months ago
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆64Updated 7 years ago
• ViennaRNA / forna
  Create force-directed graphs of RNA secondary structures.
  ☆102Updated 4 years ago
• Lattice-Automation / primers
  A PCR primer tool for DNA assembly flows
  ☆32Updated last year
• psathyrella / partis
  B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction
  ☆58Updated last week
• benchling / clustalo-python
  A Python wrapper around Clustal Omega (http://www.clustal.org/omega/)
  ☆23Updated 3 years ago
• Benjamin-Lee / CodonAdaptationIndex
  Python Implementation of Codon Adaption Index
  ☆37Updated 2 years ago
• GreiffLab / immuneSIM
  ☆38Updated last year