An RNA manipulation library.
☆56Feb 16, 2024Updated 2 years ago
Alternatives and similar repositories for forgi
Users that are interested in forgi are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Create force-directed graphs of RNA secondary structures.☆115Jun 6, 2020Updated 6 years ago
- Sample and predict coarse grain 3D RNA structures☆10Feb 12, 2024Updated 2 years ago
- The ViennaRNA Package☆438Feb 24, 2026Updated 7 months ago
- A container for the forna visualization software.☆22May 30, 2024Updated 2 years ago
- A platform to do RNA science☆28Mar 7, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- RNAlien - unsupervised RNA family model construction☆13Jun 8, 2021Updated 5 years ago
- ☆18May 11, 2026Updated 4 months ago
- A pipeline for structural clustering of RNA secondary structures☆15Apr 21, 2021Updated 5 years ago
- Template-based RNA secondary structure visualization☆29Aug 31, 2026Updated last month
- omniCLIP is a CLIP-Seq peak caller☆16Nov 14, 2020Updated 5 years ago
- Analyse Nucleic Acids Structure and Simulations with baRNAba☆59Mar 20, 2024Updated 2 years ago
- SHApe simulation with graph KERnels☆10May 17, 2021Updated 5 years ago
- HiGlass track for displaying arcs between disconnected regions☆10Dec 13, 2022Updated 3 years ago
- MONSDA, Modular Organizer of Nextflow and Snakemake driven hts Data Analysis☆12Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- C++ parser to read data from MATLAB .mat files☆10Oct 12, 2014Updated 11 years ago
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆31Aug 9, 2024Updated 2 years ago
- Dockerfiles to build Galaxy images☆24Aug 22, 2023Updated 3 years ago
- GraphProt: modelling binding preferences of RNA-binding proteins☆21Jul 19, 2018Updated 8 years ago
- to assess structural quality of RNA using 3D CNN☆15Aug 17, 2018Updated 8 years ago
- A Kotlin DSL to create and plot RNA 2D structures. The drawing engine behind RNArtist to be used from the command line.☆34Updated this week
- awesome tools for RNA☆17Nov 15, 2022Updated 3 years ago
- Accompanying repository for GkmExplain paper☆24Aug 20, 2020Updated 6 years ago
- Galaxy RNA workbench☆41Oct 10, 2020Updated 5 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- RNAcode - Detecting protein coding genes in multiple sequence alignment☆27Aug 22, 2024Updated 2 years ago
- Nucleic acids Structure Prediction☆10May 21, 2020Updated 6 years ago
- RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.☆106May 23, 2025Updated last year
- ☆14Dec 10, 2018Updated 7 years ago
- Draw RNA secondary structures☆10Aug 20, 2021Updated 5 years ago
- Python snippets for PyMOL to be run in Jupyterlab via the jupyterlab-snippets-multimenus extension.☆26May 9, 2024Updated 2 years ago
- Python implementation of the FR3D software for searching and annotating RNA 3D structures☆26Oct 2, 2026Updated last week
- ☆26Jul 21, 2023Updated 3 years ago
- Contact-based protein structure prediction☆10Feb 12, 2019Updated 7 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Efficient algorithms for designing orthogonal DNA sequence libraries☆13Oct 23, 2024Updated last year
- Semiautomated layout of RNA tertiary structure diagrams☆17Feb 26, 2025Updated last year
- A suite for the analysis of CLIP-Seq datasets.☆12Jan 31, 2022Updated 4 years ago
- Multiple sequence alignment visualizer☆35Jan 26, 2023Updated 3 years ago
- networkx graphs to ascii☆11Jun 18, 2026Updated 3 months ago
- Improved ab initio protein structure reconstruction☆15Mar 7, 2018Updated 8 years ago
- Integrative Python library for RNA Secondary Structure Analysis☆20Mar 26, 2025Updated last year