harryhaller001 / keggtoolsLinks
Library for KEGG pathway enrichment analysis
☆16Updated 4 months ago
Alternatives and similar repositories for keggtools
Users that are interested in keggtools are comparing it to the libraries listed below
Sorting:
- Multi-omics factor analysis v2☆51Updated 11 months ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆52Updated 4 months ago
- Multimodal Data (.h5mu) implementation for Python☆98Updated 4 months ago
- ☆56Updated 4 months ago
- bioinformatics plotting and tools☆59Updated last year
- Flow & mass cytometry analytics.☆54Updated last week
- Normalization of RNA-seq gene expression☆101Updated 3 months ago
- ☆45Updated this week
- A neural network framework for predicting the Hi-C chromatin interactions from megabase scale DNA sequence☆33Updated last year
- Porting DESeq2 into python via rpy2☆68Updated 2 years ago
- A simple pythonic interface to biomart.☆56Updated 5 years ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆69Updated last week
- Splicing Neo Antigen Finder (SNAF) is an easy-to-use Python package to identify splicing-derived tumor neoantigens from RNA sequencing da…☆48Updated 8 months ago
- sequence-based prediction of multiscale genome structure from kilobase to whole-chromosome scale☆92Updated 7 months ago
- BESCA (Beyond Single Cell Analysis) offers python functions for single-cell analysis☆50Updated 4 months ago
- Unified knowledge-driven network inference from omics data☆85Updated 2 months ago
- Molecular interactions inference from single-cell multi-omics data☆27Updated 2 weeks ago
- Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.☆84Updated 4 years ago
- InMoose is the INtegrated Multi Omic Open Source Environment. It is a collection of tools for the analysis of omic data.☆108Updated last month
- Cellxgene Gateway allows you to use the Cellxgene Server provided by the Chan Zuckerberg Institute (https://github.com/chanzuckerberg/cel…☆66Updated last year
- Parsing tools for GTF (gene transfer format) files☆121Updated 7 months ago
- CZ CELLxGENE Discover Census☆110Updated this week
- A scalable python-based framework for gene regulatory network inference using tree-based ensemble regressors.☆60Updated last year
- Toolkit for highly memory efficient analysis of single-cell RNA-Seq, scATAC-Seq and CITE-Seq data. Analyze atlas scale datasets with mill…☆104Updated 5 months ago
- Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.☆65Updated 4 years ago
- Weighted Nearest Neighbors Analysis implemented in Python (pyWNN)☆18Updated 4 years ago
- Work with trained factor models in Python☆35Updated 11 months ago
- Fast-ish (and correct!) quantile normalization in Python.☆31Updated 4 months ago
- ☆26Updated 4 months ago
- Tied Diffusion for Subnetwork Discovery (TieDIE)☆37Updated 3 years ago