Modelling RBP binding preferences to predict RPB binding sites
☆11Aug 11, 2023Updated 2 years ago
Alternatives and similar repositories for RNAProt
Users that are interested in RNAProt are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MONSDA, Modular Organizer of Nextflow and Snakemake driven hts Data Analysis☆12Apr 1, 2026Updated last week
- GraphProt: modelling binding preferences of RNA-binding proteins☆20Jul 19, 2018Updated 7 years ago
- A pipeline for structural clustering of RNA secondary structures☆15Apr 21, 2021Updated 4 years ago
- 🔝 The amazing Galaxy Tour Builder web extension. // See demo 👉☆17Jun 2, 2020Updated 5 years ago
- ☆19Mar 21, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Predicting dynamic cellular protein-RNA interactions using deep learning and in vivo RNA structure☆66Mar 3, 2024Updated 2 years ago
- A library for counting small kmer frequencies in nucleotide sequences.☆27Oct 29, 2024Updated last year
- An Interpretable Self-Attention Network with block-attention and attention-attribution.☆12Sep 22, 2023Updated 2 years ago
- 基于YoloV3和行人重识别模型的特定行人检索☆12May 25, 2022Updated 3 years ago
- Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data☆31Feb 7, 2026Updated 2 months ago
- Transform data from RCSB Protein Data Bank for secondary structure prediction☆12Feb 20, 2019Updated 7 years ago
- Pipeline to call somatic cancer neoantigens from mutations in patient tumor DNA☆14Feb 16, 2023Updated 3 years ago
- Draw RNA secondary structures in python.☆52Jun 24, 2025Updated 9 months ago
- ☆37Jan 14, 2025Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- HiGlass track for displaying arcs between disconnected regions☆10Dec 13, 2022Updated 3 years ago
- A collection of Groovy classes that provide utility services to nextflow pipelines.☆13Oct 25, 2022Updated 3 years ago
- SGQuant: Squeezing the Last Bit on Graph Neural Networks with Specialized Quantization☆11Aug 12, 2020Updated 5 years ago
- ECML16: GaKCo: a Fast Gapped k-mer string Kernel using Counting☆14Aug 28, 2019Updated 6 years ago
- ☆29Nov 6, 2022Updated 3 years ago
- Golang VNC screenshot utility☆13Feb 19, 2018Updated 8 years ago
- Interpretable model of sub-cellular RNA localization.☆12Dec 19, 2022Updated 3 years ago
- Twitter retrosynthesis bot☆13Jul 10, 2022Updated 3 years ago
- ☆13Oct 3, 2017Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- kallisto index tag extractor☆20Jul 6, 2019Updated 6 years ago
- A pipeline for Human GWAS analysis that accomodates both Affymetrix (raw .CEL files) and Illumina (Plink binaries) data☆12May 14, 2018Updated 7 years ago
- python codes for iDNA-ABF: multi-scale deep biological language learning model for the accurate and interpretable prediction of DNA methy…☆15May 6, 2024Updated last year
- Rhetorical sentence classification using LLMs☆11Oct 26, 2025Updated 5 months ago
- init commit☆15Oct 31, 2023Updated 2 years ago
- Deconvolution of RNA Alternative COnformations☆15Updated this week
- Sample-specific CircRNA Viewer☆11Aug 15, 2018Updated 7 years ago
- ☆10Aug 29, 2023Updated 2 years ago
- ☆18Dec 5, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- SHAPE-guided RNA structural homology search☆12Aug 12, 2025Updated 7 months ago
- Edit distance library for Haskell☆27Jan 19, 2017Updated 9 years ago
- MASIC generates selected ion chromatograms (SICs) for all of the parent ions chosen for fragmentation in an LC-MS/MS analysis, characteri…☆17Dec 4, 2025Updated 4 months ago
- Notes on analysing RNAseq, focusing on alternative splicing & polyadenylation.☆12Nov 23, 2021Updated 4 years ago
- Octree is a shallow tree structure for 3-dimensional points☆20Jul 22, 2020Updated 5 years ago
- Cell2location paper - Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics☆15Nov 26, 2022Updated 3 years ago
- ☆12Sep 27, 2018Updated 7 years ago