dmaticzka / GraphProtLinks
GraphProt: modelling binding preferences of RNA-binding proteins
☆20Updated 7 years ago
Alternatives and similar repositories for GraphProt
Users that are interested in GraphProt are comparing it to the libraries listed below
Sorting:
- HLA-II ligand predictor.☆46Updated 2 years ago
- ☆19Updated last year
- ☆20Updated last year
- ☆38Updated 2 years ago
- HLA-I ligand predictor☆43Updated 4 months ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆43Updated 3 weeks ago
- MHC Class I and Class II neoantigen binding prediction☆34Updated 6 months ago
- a framework for predicting global protein-protein interaction networks from dynamic mass spec data☆24Updated last year
- A method to predict DNA shape features considering farther flanking region.☆38Updated last year
- Deep learning model to predict degron sequences☆19Updated 2 years ago
- An Improved Algorithm to Measure the Semantic Similarity of Gene Ontology Terms☆18Updated 5 years ago
- Knowledge-primed neural networks☆38Updated 2 years ago
- Multi-Omics Peptide Generator☆30Updated 3 months ago
- Code for "Optimizing 5’UTRs for mRNA-delivered gene editing using deep learning"☆23Updated last year
- Absolute quantification package based on quantms.io☆16Updated 4 months ago
- Promoter activity measurement and modeling; artificial promoter design and testing☆13Updated 2 years ago
- an online cancer cell line catalogue integrating HLA type, predicted neo-epitopes, virus and gene expression☆12Updated last year
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆44Updated last week
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆20Updated 3 years ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 4 years ago
- Comprehensive Python client for the Uniprot REST API☆55Updated 4 months ago
- Absolve antibody variable domain sequence analysis☆18Updated 7 years ago
- accurate prediction of promoter activity and variant effects from massive parallel reporter assays☆43Updated 7 months ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆73Updated last week
- 🧛 Deep generative models for TCR sequences 🧛☆17Updated 3 years ago
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated last year
- Functional Embedding of Gene Signatures☆48Updated last year
- RiboNN: predicting translation efficiencies from mRNA sequences☆50Updated 3 weeks ago
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆62Updated this week
- ☆25Updated 4 months ago