bgruening / docker-recipes
Dockerfiles to build Galaxy images
☆24Updated last year
Related projects ⓘ
Alternatives and complementary repositories for docker-recipes
- Tools for next-generation sequencing analysis☆88Updated 5 years ago
- Analysis from kallisto paper☆32Updated 8 years ago
- conda recipes for genomic data☆85Updated 3 years ago
- ☆35Updated last month
- Mapped QC analysis program☆42Updated 6 years ago
- Galaxy RNA workbench☆39Updated 4 years ago
- De novo transcriptome assembler for short reads☆62Updated 6 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated last year
- A collection of modules and sub-workflows for Nextflow☆26Updated this week
- Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.☆51Updated 6 years ago
- ☆21Updated 4 years ago
- Ensembl tools☆34Updated 3 weeks ago
- mtDNA Variant Caller☆32Updated last month
- The Zika bioinformatics pipeline☆34Updated 4 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- Method for detecting STR expansions from short-read sequencing data☆62Updated 2 years ago
- Analysis Framework for Biological Data from High Throughput Experiments☆34Updated 8 years ago
- Bamgineer: Introduction of simulated allele-specific copy number variants into exome and targeted sequence data sets☆37Updated 4 years ago
- Maximum likelihood demultiplexing☆46Updated last year
- Validate FastQ Files☆36Updated 6 years ago
- An automated RNA-seq pipeline using Nextflow☆37Updated 2 months ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Updated 5 months ago
- List of IARC bioinformatics nextflow pipelines☆47Updated 3 months ago
- R package for inferring copy number from read depth☆31Updated 2 years ago
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆51Updated 4 years ago
- A tool to benchmark mappers and different parameters within minutes☆43Updated 5 years ago
- Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.githu…☆24Updated last month
- simple library for dealing with SAM cigar strings☆40Updated 3 years ago
- ☆13Updated 7 years ago